Graph of OncoSimulR
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  • 3291e0a (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 09:53:24 -0400;
  • 52cb97a (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 09:53:24 -0400;
  • 14101d9 (origin/RELEASE_3_19, RELEASE_3_19) v.4.6.1. Remove support for maOS with arm64 by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-10-09 22:29:05 +0200;
  • d347aea v 4.7.8. Remove support for maOS with arm64 by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-10-09 22:25:38 +0200;
  • 67b7fa8 4.7.7. Fixing previous mistaken version. by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-09-18 22:48:52 +0200;
  • bb20410 4.7.4: more kjohnson3 test errors by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-09-18 22:47:34 +0200;
  • f6f0181 4.7.6: more commenting out tests that fail in kjohnson3 by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-09-16 22:36:30 +0200;
  • 3b3853f 4.7.5: commenting out failing tests in kjohnson3 by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-09-12 20:27:48 +0200;
  • abef61d 4.7.4: more kjohnson3 poltergeist by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-07-30 11:28:04 +0200;
  • d8bc806 4.7.3; more kjohnson3 failures by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-07-26 20:14:21 +0200;
  • 3e72d4c 4.7.2. more kjohnson3 machine workarounds by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-07-25 12:13:35 +0200;
  • 9ca4890 4.7.1. Fix kjohnson3 failure, Note lost braces, miscell minor by Ramon Diaz-Uriarte <rdiaz02@gmail.com> 2024-07-23 14:31:22 +0200;
  • c3dd5c6 bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 10:37:33 -0400;
  • 4fd9846 bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 10:37:33 -0400;
  • 70a7038 bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:00:08 -0400;
  • c736f65 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:00:08 -0400;
  • e54b258 4.3.3: fix failing Linux aarch64 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-07-17 13:22:04 +0200;
  • bee9979 4.3.2: did not update the date by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-06-03 09:46:51 +0200;
  • 532b977 4.3.1: rftiness seed to MAGELLAN and bug fix when scaling by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-06-03 09:41:28 +0200;
  • a506b5c bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:33:19 -0400;
  • 70d2cd7 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:33:19 -0400;
  • 8fddac0 4.1.4 --- updated exprTk and removed CXX_STD by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-03-08 20:30:52 +0100;
  • eee6c7e (origin/RELEASE_3_16, RELEASE_3_16) version bump in release by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-02-20 20:06:33 +0100;
  • 6a6e79e no longer needed to specify CXX_STD = CXX14 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-02-20 20:00:22 +0100;
  • 6c42fad version bump in devel by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-02-20 20:04:27 +0100;
  • 99789c7 no longer needed to specify CXX_STD = CXX14 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-02-20 20:00:22 +0100;
  • 2827481 typo in NEWS by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-02-20 19:38:19 +0100;
  • 19885ad v.4.1.1: do not import .rbind.data.table by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-02-20 19:01:31 +0100;
  • 2665ee8 v.4.0.1: do not import .rbind.data.table by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2023-02-20 18:56:24 +0100;
  • a61b2fd 4.1.1: improved and faster intervention tests by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-11-24 14:24:15 +0100;
  • 68f0ed7 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:10:00 -0400;
  • ab214e8 bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:10:00 -0400;
  • dd44379 3.99.12 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-10-19 21:10:17 +0200;
  • 236c8ee 3.99.11: increase max.wall.time in two tests that can take very long in Windoze by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-10-13 23:54:17 +0200;
  • 7a661a4 3.99.10; faster vignette, onlyCancer=FALSE, plot fails with sensible error if simulation had exception by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-10-13 15:32:19 +0200;
  • b5bcb5a 3.99.9: vignette problem ARM64 Mac build? by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-10-01 13:40:27 +0200;
  • 96de909 3.99.8: unity build, miscell typo fixes by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-09-16 01:29:20 +0200;
  • ea2792e 3.99.8 unity build by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-09-15 21:31:14 +0200;
  • 9d183dd 3.99.8: unity build by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-09-15 21:29:51 +0200;
  • 7d0e975 3.99.7: c++14 and no o3 in win to try faster build by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-09-13 17:28:36 +0200;
  • 3c3d972 ooops, wrong date by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-09-12 20:23:45 +0200;
  • 9579efe 3.99.6: exprtk updated by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-09-12 20:21:57 +0200;
  • a65c8e8 exprtk updated by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-09-12 18:47:53 +0200;
  • 98e9f87 3.99.5; logo funding by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-07-19 16:19:56 +0200;
  • add8cdf 3.99.4: fixing failing test.Z-interventions on Mac by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-07-04 23:06:23 +0200;
  • 5505160 3.99.3: failing a test in Mac OS by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-06-30 14:59:27 +0200;
  • 4001b0c 3.99.2 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-06-29 15:37:33 +0200;
  • 0dae6b3 3.99.2 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-06-29 14:44:37 +0200;
  • 79ffadf 3.99.1: interventions, death with fdf, user variables by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2022-06-25 16:24:13 +0200;
  • 7af7ac6 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:20:38 +0000;
  • 17fdf39 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:20:38 +0000;
  • 154875d bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:14:49 +0000;
  • 7521636 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:14:49 +0000;
  • ad38a80 3.1.2, better test of poset transformation by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2021-10-06 22:18:41 +0200;
  • 4127435 3.1.1: XOR, AND, OR: plots of DAGs honor all possible values by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2021-10-06 20:38:06 +0200;
  • d7183c4 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:06:18 +0000;
  • 3add541 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:06:18 +0000;
  • d0ae1fb increased version to force rebuild with new NEWS file by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2021-05-04 15:12:02 +0200;
  • e524981 NEWS file updated for BioC release by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2021-05-04 15:11:15 +0200;
  • e5e1295 2.99.93; fixed bugs and test errors for three-element vector by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2021-04-30 01:22:43 +0200;
  • 43ee9ba 2.99.92: rfitness with a three-element vector for scale and SSWM examples by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2021-04-27 15:58:19 +0200;
  • b56a9e8 v. 2.99.9: fixed one-gene cases, nem in Readme, typos; removin unused code and v.1 from long tests by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2021-04-22 12:27:49 +0200;
  • 6f7ba7f v.2.99.7 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-30 16:01:49 +0100;
  • 3c244b0 correct date by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-30 01:43:01 +0100;
  • 007e09e v.2.99.6: no v.1, slightly faster vignette by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-30 01:39:06 +0100;
  • f417ffe v. 2.99.6: no v.1 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-30 01:29:19 +0100;
  • 04c0640 2.99.5 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-18 23:20:58 +0100;
  • a43f498 2.99.4 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-17 16:07:07 +0100;
  • 8d0896d v. 2.99.3 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-13 15:35:47 +0100;
  • 630adf2 2.99.2 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-11 21:53:48 +0100;
  • 4068375 version 2.99.1: frequency-dependent fitness functionality by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-12-10 12:41:53 +0100;
  • ddca1e2 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:57:45 -0400;
  • 1990185 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:57:45 -0400;
  • f4821fe 2.19.2: Updated ctb: added Magellan and exprTk and clarified contributions by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-06-03 15:57:39 +0200;
  • 0a9f141 2.19.1 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-05-06 12:10:54 +0200;
  • 5d22ac2 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:41:48 +0000;
  • f3a1274 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:41:48 +0000;
  • a947da6 2.17.92 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-04-27 01:20:51 +0200;
  • 4df5e78 oooops, was failing tests in windows by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-04-24 04:20:12 +0200;
  • ae7dfb0 2.17.91: fixed warning with Wrestrict from Magellan sources by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-04-24 03:29:59 +0200;
  • 2d6b985 (origin/RELEASE_3_10, RELEASE_3_10) 2.16.1; fixed warnings and "the condition has length > 1" by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-04-10 14:23:01 +0200;
  • 36283a6 2.17.9: POM doc and adapt to stringsAsFactors = FALSE by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-03-17 13:31:37 +0100;
  • 087f64d 2.17.8 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-02-02 00:58:49 +0100;
  • eb53711 2.17.7: no longer depends on nem; more models from MAGELLAN by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2020-01-30 14:39:14 +0100;
  • 71e4aac 2.17.5 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-12-19 21:22:38 +0100;
  • 0796b29 2.17.4 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-12-19 09:27:20 +0100;
  • 00d80a9 2.17.3: here is where fno-common should be by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-12-17 16:17:37 +0100;
  • f63ae90 2.17.2: fno-common by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-12-17 16:14:43 +0100;
  • 4912fe1 2.17.2: if with logical length > 1 fixed by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-12-17 12:25:52 +0100;
  • edc593d 2.17.1: rfitness, clarified log and truncate, and Magellan_stats, return vector and do not use log by default by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-11-28 20:58:05 +0100;
  • f973f21 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:37:44 -0400;
  • 753d7de bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:09:01 -0400;
  • fefc3cf fscanf warning under Linux with BioC by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-08-14 12:38:39 +0200;
  • fd073de 2.15.1: Added MAGELLANs sources and functionality from MAGELLAN by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-07-02 16:55:40 +0200;
  • cba8a2f bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:39 -0400;
  • 2a871d8 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:48 -0400;
  • 4ac900b 2.13.2 by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-03-18 12:11:47 +0100;
  • edc25f8 v 2.13.1: works with STRICT_R_HEADERS by ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com> 2019-02-07 19:45:19 +0100;
  • 4116089 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:33 -0400;
  • 10d3d45 (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:54 -0400;