... | ... |
@@ -1,8 +1,8 @@ |
1 | 1 |
Package: OncoSimulR |
2 | 2 |
Type: Package |
3 | 3 |
Title: Forward Genetic Simulation of Cancer Progression with Epistasis |
4 |
-Version: 3.99.8 |
|
5 |
-Date: 2022-09-15 |
|
4 |
+Version: 3.99.9 |
|
5 |
+Date: 2022-09-30 |
|
6 | 6 |
Authors@R: c( |
7 | 7 |
person("Ramon", "Diaz-Uriarte", role = c("aut", "cre"), |
8 | 8 |
email = "rdiaz02@gmail.com"), |
... | ... |
@@ -1,3 +1,7 @@ |
1 |
+Changes in version 3.99.9 (2022-09-30): |
|
2 |
+ - Minor vignette split of code, to try to detect |
|
3 |
+ location of problem with ARM64 Mac build. |
|
4 |
+ |
|
1 | 5 |
Changes in version 3.99.8 (2022-09-15): |
2 | 6 |
- Using "Unity builds" to decrease build (compilation) time; |
3 | 7 |
see file inst/miscell/README_Unity_compilation. |
... | ... |
@@ -9792,7 +9792,11 @@ afe4 <- allFitnessEffects(genotFitness = r1fd, |
9792 | 9792 |
frequencyDependentFitness = TRUE, |
9793 | 9793 |
frequencyType = "rel") |
9794 | 9794 |
|
9795 |
+mtfd <- allMutatorEffects(epistasis = c("A" = 0.1, |
|
9796 |
+ "B" = 10)) |
|
9797 |
+``` |
|
9795 | 9798 |
|
9799 |
+```{r fdfmutex1} |
|
9796 | 9800 |
set.seed(1) |
9797 | 9801 |
s1fd <- oncoSimulIndiv(afe4, |
9798 | 9802 |
model = "McFL", |
... | ... |
@@ -9805,10 +9809,10 @@ s1fd <- oncoSimulIndiv(afe4, |
9805 | 9809 |
errorHitMaxTries = FALSE, |
9806 | 9810 |
errorHitWallTime = FALSE) |
9807 | 9811 |
plot(s1fd, show = "genotypes") |
9812 |
+``` |
|
9808 | 9813 |
|
9809 | 9814 |
|
9810 |
-mtfd <- allMutatorEffects(epistasis = c("A" = 0.1, |
|
9811 |
- "B" = 10)) |
|
9815 |
+```{r fdfmutex2} |
|
9812 | 9816 |
set.seed(1) |
9813 | 9817 |
s2fd <- oncoSimulIndiv(afe4, |
9814 | 9818 |
muEF = mtfd, |