ontoProc -- an R package for working with multiple biomedical ontologies
Includes the ctmarks app for examining cell types through ontological characterization
![](https://github.com/vjcitn/ontoProc/raw/main/ctmarks.png)
We also consider how to produce OBO stanzas for expanding existing ontologies
![](https://github.com/vjcitn/ontoProc/raw/main/ldfToTerm.png)
With this we can formally describe novel cell types (CL:X01 is an 'extended CL tag')
![](https://github.com/vjcitn/ontoProc/raw/main/GRIK3table.png)