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  • 138f3c9 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 11:04:02 -0400;
  • ce39e9d (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 11:04:02 -0400;
  • cc5f050 Oct 24 Bioc 10.14 new push by KonstantinosKardamiliotis <k.kardamiliotis@gmail.com> 2024-10-14 12:29:01 +0300;
  • cb7de6a Oct 24 Bioc new release fix errors by KonstantinosKardamiliotis <k.kardamiliotis@gmail.com> 2024-10-11 16:46:16 +0300;
  • 4f905c1 Oct 24 Bioc release by KonstantinosKardamiliotis <k.kardamiliotis@gmail.com> 2024-10-07 13:37:51 +0300;
  • 32a5a99 bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:37:08 -0400;
  • 7bea195 (origin/RELEASE_3_19, RELEASE_3_19) bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:37:08 -0400;
  • 1137322 Bioconductor_April_release_final_commit by KonstantinosKardamiliotis <k.kardamiliotis@gmail.com> 2024-04-26 13:18:32 +0300;
  • ed7681a Bioconductor April release commit by KonstantinosKardamiliotis <k.kardamiliotis@gmail.com> 2024-04-26 12:07:12 +0300;
  • df7ee23 Bioconductor 3.19 release commit by KonstantinosKardamiliotis <k.kardamiliotis@gmail.com> 2024-04-24 11:38:57 +0300;
  • 085dada bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:36:12 -0400;
  • 7dc2b86 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:36:12 -0400;
  • f51f547 Update version by KonstantinosKardamiliotis <k.kardamiliotis@gmail.com> 2023-10-16 14:54:43 +0300;
  • e2c3a90 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:32:34 -0400;
  • 6f55d46 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:32:34 -0400;
  • ac9e63c add pryr to Suggests packages by aspaor <aspasiaor@hotmail.com> 2023-04-21 11:58:55 +0300;
  • 69c6287 fix check / remove logfile by aspaor <aspasiaor@hotmail.com> 2023-04-19 13:59:46 +0300;
  • 01a97b4 Fix Vignette Error by aspaor <aspasiaor@hotmail.com> 2023-04-11 12:25:11 +0300;
  • 65ea056 Update version by aspaor <aspasiaor@hotmail.com> 2023-04-07 12:36:45 +0300;
  • acca0a0 Update version by aspaor <aspasiaor@hotmail.com> 2023-04-07 12:34:44 +0300;
  • ba15aa5 Merge branch 'master' of https://github.com/BiodataAnalysisGroup/tripr by aspaor <aspasiaor@hotmail.com> 2023-04-07 12:18:14 +0300;
  • ef51eb2 Update version 1.3.11 by aspaor <aspasiaor@hotmail.com> 2023-04-07 12:10:50 +0300;
  • 19cf678 Merge pull request <a href="#10">#10</a> from BiodataAnalysisGroup/dev by Aspasia Orfanou <44154688+aspaor@users.noreply.github.com> 2023-04-07 10:56:14 +0300;
  • 1f273b4 fix clonotypes output file by aspaor <aspasiaor@hotmail.com> 2023-03-30 15:40:37 +0300;
  • b7b6b64 Update version by aspaor <aspasiaor@hotmail.com> 2023-03-09 10:52:34 +0200;
  • 4012520 Fix High Sim Rep Extraction by aspaor <aspasiaor@hotmail.com> 2023-03-09 10:49:05 +0200;
  • 8e51c17 fix repertoire extraction by aspaor <aspasiaor@hotmail.com> 2023-01-19 16:13:24 +0200;
  • 39b4ec2 fix alignment error by aspaor <aspasiaor@hotmail.com> 2022-12-09 10:36:46 +0200;
  • 7ec83d5 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:25:37 -0400;
  • abfb7d8 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:25:37 -0400;
  • ca60b6a replace mclapply by aspaor <aspasiaor@hotmail.com> 2022-09-23 12:56:14 +0300;
  • ec71c12 fix high_similar_clonotype by aspaor <aspasiaor@hotmail.com> 2022-09-23 11:32:59 +0300;
  • db060f1 Fix shared clonotypes and logfiles error by aspaor <aspasiaor@hotmail.com> 2022-09-13 17:09:37 +0300;
  • 89a18e4 Update DESCRIPTION contributors by aspaor <aspasiaor@hotmail.com> 2022-08-19 15:18:07 +0300;
  • 38d2498 Rewrite Clonotypes function by aspaor <aspasiaor@hotmail.com> 2022-07-18 16:59:52 +0300;
  • 6614d9b Fix BiocCheck errors, Automated File Storage by aspaor <aspasiaor@hotmail.com> 2022-06-17 17:23:17 +0300;
  • 430cda9 Reduce time of Clonotypes function by aspaor <aspasiaor@hotmail.com> 2022-06-15 17:53:32 +0300;
  • 4821ae0 Merge branch 'master' into dev by aspaor <aspasiaor@hotmail.com> 2022-05-24 16:23:52 +0300;
  • 23541cb Update README by aspaor <aspasiaor@hotmail.com> 2022-05-24 16:16:23 +0300;
  • 9ae16a3 change dplyr to data.table in helpers.R by aspaor <aspasiaor@hotmail.com> 2022-05-19 16:33:13 +0300;
  • f67c2f4 change outputfile name and make it temporary during check by aspaor <aspasiaor@hotmail.com> 2022-05-18 16:55:25 +0300;
  • 0737f81 add maintainer change by aspaor <aspasiaor@hotmail.com> 2022-05-18 11:58:56 +0300;
  • fa2974e update description by aspaor <aspasiaor@hotmail.com> 2022-05-17 14:29:09 +0300;
  • 06d1020 Change maintainer by aspaor <aspasiaor@hotmail.com> 2022-05-17 13:39:45 +0300;
  • 7878349 replace read.csv with fread by aspaor <aspasiaor@hotmail.com> 2022-05-11 12:31:11 +0300;
  • 242653d bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:18:11 +0000;
  • 5ed7bca (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:18:11 +0000;
  • a3eb15a change Maintainer by unknown <nikosp41@gmail.com> 2022-03-23 13:10:54 +0200;
  • b567f4f bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:12:22 +0000;
  • ba301e8 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:12:22 +0000;
  • 5ed6ebf Update README.md by iofeidis <jasonof75@gmail.com> 2021-09-30 15:38:09 +0300;
  • 4d29763 First post-review commit by iofeidis <jasonof75@gmail.com> 2021-09-22 10:06:27 +0300;
  • 8a7f229 Add Argument Checking by iofeidis <jasonof75@gmail.com> 2021-09-20 15:41:03 +0300;
  • 4cf7855 Delete commented-out blocks by iofeidis <jasonof75@gmail.com> 2021-09-20 14:07:40 +0300;
  • 4168f73 Bioc Fix 1 by iofeidis <jasonof75@gmail.com> 2021-09-20 12:57:32 +0300;
  • d8e7f85 Add New Logo (#7) by Iason Ofeidis <jasonof75@gmail.com> 2021-09-15 11:07:11 +0300;
  • 333dfa8 Fix Logo Plots by iofeidis <jasonof75@gmail.com> 2021-09-06 14:01:41 +0300;
  • e51e552 Remove `1:n` from data.tables by iofeidis <jasonof75@gmail.com> 2021-09-02 15:04:10 +0300;
  • ccce536 Change `num_of_cores` by iofeidis <jasonof75@gmail.com> 2021-09-02 10:04:31 +0300;
  • cb2bd9a Final pre-review commit by iofeidis <jasonof75@gmail.com> 2021-09-01 13:05:55 +0300;
  • 48b0333 Delete tripr-guide.html by iofeidis <jasonof75@gmail.com> 2021-08-31 16:03:19 +0300;
  • 9e95610 Use `logfile()` in zzz.R by iofeidis <jasonof75@gmail.com> 2021-08-31 15:30:54 +0300;
  • 2f5c1b6 Fix grouped_alignment issue by iofeidis <jasonof75@gmail.com> 2021-08-31 14:57:55 +0300;
  • 14411aa Toy commit by iofeidis <jasonof75@gmail.com> 2021-08-31 12:44:04 +0300;
  • af38e0d Fix <a href="#2">#2</a> by iofeidis <jasonof75@gmail.com> 2021-08-30 16:25:21 +0300;
  • 3305b66 Add inst/script for example dataset by iofeidis <jasonof75@gmail.com> 2021-08-30 16:12:59 +0300;
  • b5ce1de First Rscript commit by iofeidis <jasonof75@gmail.com> 2021-08-30 12:56:27 +0300;
  • 52eade0 Remove `StagedInstall:no` by iofeidis <jasonof75@gmail.com> 2021-08-30 12:03:23 +0300;
  • 7c65a9f Add `StagedInstall:no` by iofeidis <jasonof75@gmail.com> 2021-08-27 13:21:20 +0300;
  • 506e098 Change logFile place by iofeidis <jasonof75@gmail.com> 2021-08-26 14:42:44 +0300;
  • ff3ff81 Dev PR / Minor changes (#5) by Iason Ofeidis <jasonof75@gmail.com> 2021-08-26 13:25:45 +0300;
  • 6042a13 Update vignette by iofeidis <jasonof75@gmail.com> 2021-08-12 14:29:35 +0300;
  • c869d03 Update Bibliography vignette by iofeidis <jasonof75@gmail.com> 2021-08-12 11:48:41 +0300;
  • b0f5dd3 Fix .png names (capitalize) by iofeidis <jasonof75@gmail.com> 2021-08-11 15:26:39 +0300;
  • 9edebdd Fix binding issue <a href="#4">#4</a> by iofeidis <jasonof75@gmail.com> 2021-08-11 15:07:05 +0300;
  • 950a980 Fix binding issue <a href="#4">#4</a> by iofeidis <jasonof75@gmail.com> 2021-08-11 15:07:05 +0300;
  • 3b3e731 Second vignette commit by iofeidis <jasonof75@gmail.com> 2021-08-11 15:05:48 +0300;
  • d1a7dde First vignette commit by iofeidis <jasonof75@gmail.com> 2021-08-10 15:57:16 +0300;
  • 159db4c Fix fileInput by Iason Ofeidis <jasonof75@gmail.com> 2021-08-23 12:08:28 +0300;
  • c07db59 Fix binding issue <a href="#3">#3</a> by iofeidis <jasonof75@gmail.com> 2021-08-09 12:50:36 +0300;
  • 2a2a88b Minor changes by iofeidis <jasonof75@gmail.com> 2021-08-09 10:02:34 +0300;
  • 5234226 Fix binding issue <a href="#2">#2</a> by iofeidis <jasonof75@gmail.com> 2021-08-06 14:45:09 +0300;
  • 8d817a2 Add tests <a href="#1">#1</a> by iofeidis <jasonof75@gmail.com> 2021-08-06 10:40:35 +0300;
  • f3b1e84 Fix identation by iofeidis <jasonof75@gmail.com> 2021-08-04 11:55:50 +0300;
  • dbac629 First styling attempt by iofeidis <jasonof75@gmail.com> 2021-08-03 16:05:33 +0300;
  • 0ba7a47 Change '1:...' to seq_len() by iofeidis <jasonof75@gmail.com> 2021-08-03 12:31:30 +0300;
  • 58aace9 Add .Rbuildignore to repo by iofeidis <jasonof75@gmail.com> 2021-08-03 10:53:03 +0300;
  • adc19b0 Github Action on ubuntu by iofeidis <jasonof75@gmail.com> 2021-08-03 09:53:29 +0300;
  • 8306ae4 Merge pull request <a href="#1">#1</a> from iofeidis/binding by Iason Ofeidis <jasonof75@gmail.com> 2021-08-03 09:49:50 +0300;
  • a037b1f Change sapply() to vapply() by iofeidis <jasonof75@gmail.com> 2021-08-02 14:26:33 +0300;
  • fcbeefd Declare global variables by iofeidis <jasonof75@gmail.com> 2021-08-02 13:10:20 +0300;
  • 4da821f Fake biocViews by iofeidis <jasonof75@gmail.com> 2021-08-02 12:14:45 +0300;
  • b58650a Try Github Action <a href="#1">#1</a> by iofeidis <jasonof75@gmail.com> 2021-07-30 13:13:52 +0300;
  • 133c067 Add Travis-CI by iofeidis <jasonof75@gmail.com> 2021-07-30 11:54:04 +0300;
  • 7223fa5 Fix 'runnable examples' error by iofeidis <jasonof75@gmail.com> 2021-07-29 15:59:55 +0300;
  • da1674f Fix value binding error by Iason <jasonof75@gmail.com> 2021-07-29 14:40:33 +0300;
  • 4804b28 Replace file input with 'system.file()' by Iason <jasonof75@gmail.com> 2021-07-29 11:18:16 +0300;
  • d36c7c4 Add CITATION.cff by Iason <jasonof75@gmail.com> 2021-07-28 12:44:57 +0300;
  • c3bc68c Minor fixes by iofeidis <jasonof75@gmail.com> 2021-07-26 16:08:46 +0300;
  • bbcbe80 Add NEWS.md by iofeidis <jasonof75@gmail.com> 2021-07-26 15:55:44 +0300;