1. ternarynet
  2. Graph
Graph of ternarynet
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  • 251d20a (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 09:40:14 -0400;
  • 7c8c037 (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 09:40:14 -0400;
  • 4ec3c81 bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 10:27:00 -0400;
  • 817657d (origin/RELEASE_3_19, RELEASE_3_19) bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 10:27:00 -0400;
  • ad33b27 Change sprintf to snprintf in gn_Rwrap.c by mccallm <mccallm@gmail.com> 2024-02-24 09:23:37 -0500;
  • e5c6079 Version bump in DESCRIPTION by mccallm <mccallm@gmail.com> 2024-02-19 15:32:42 -0500;
  • d2b611a Modified sprintf command in util.c to snprintf and added sizeof() argument by mccallm <mccallm@gmail.com> 2024-02-18 11:44:38 -0500;
  • 116285e Bump version number by mccallm <mccallm@gmail.com> 2024-02-15 10:42:58 -0500;
  • c7bceed Fixed warning from error function in util.c by mccallm <mccallm@gmail.com> 2024-02-15 10:42:08 -0500;
  • 20c9fcf bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:49:26 -0400;
  • 8dd30d9 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:49:26 -0400;
  • 30dcc28 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:22:21 -0400;
  • 96129e2 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:22:21 -0400;
  • c1b8526 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:06:42 -0400;
  • f8b1db5 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:06:42 -0400;
  • 1240670 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:10:20 +0000;
  • a1cdafd (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:10:19 +0000;
  • 5e7b0fe bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:02:04 +0000;
  • a463985 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:02:04 +0000;
  • b694ef6 Increase cycle number for tests by mccallm <mccallm@gmail.com> 2021-10-19 13:07:07 -0400;
  • 5eeae72 Trying to fix memory errors on 32-bit windows by mccallm <mccallm@gmail.com> 2021-10-14 10:54:55 -0400;
  • 2c31b55 Increase number of cycles for test_smallmodel_2.R by mccallm <mccallm@gmail.com> 2021-10-07 13:38:46 -0400;
  • 508397c Last round of conversion to dyanmic memory allocation. by mccallm <mccallm@gmail.com> 2021-10-05 09:45:50 -0400;
  • 8dd799c More memory handling changes. by mccallm <mccallm@gmail.com> 2021-09-08 14:38:31 -0400;
  • 0e3b7cf Start to reintroduce malloc by mccallm <mccallm@gmail.com> 2021-06-17 10:08:59 -0400;
  • 6666576 Start to reintroduce malloc by mccallm <mccallm@gmail.com> 2021-06-17 10:05:44 -0400;
  • 02a1e90 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:51:29 +0000;
  • cb404d2 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:51:29 +0000;
  • 27f8295 Roll back malloc changes. by mccallm <mccallm@gmail.com> 2021-04-23 10:50:35 -0400;
  • f7d321b Version bump. by mccallm <mccallm@gmail.com> 2021-04-20 13:04:56 -0400;
  • 2d6530a Change to malloc for memory usage. by mccallm <mccallm@gmail.com> 2021-04-19 15:45:22 -0400;
  • c1cf089 Change max nodes / experiments to 200. by mccallm <mccallm@gmail.com> 2021-04-16 10:09:41 -0400;
  • 6e135e5 Update vignette to focus on new code by mccallm <mccallm@gmail.com> 2021-04-15 14:13:14 -0400;
  • f4a19b6 Update CITATION by mccallm <mccallm@gmail.com> 2021-04-15 14:09:49 -0400;
  • 5f7ca74 Update code base to latest version from Harry by mccallm <mccallm@gmail.com> 2021-04-15 13:33:56 -0400;
  • 6238b5b Add unit tests, update code base to latest version from Harry by mccallm <mccallm@gmail.com> 2021-04-15 13:32:48 -0400;
  • 8d66d94 Update DESCRIPTION, NAMESPACE, NEWS, and configure.ac files. by mccallm <mccallm@gmail.com> 2021-04-15 13:21:32 -0400;
  • e660ff5 Fixed conflicts in version change by mccallm <mccallm@gmail.com> 2021-04-15 13:08:09 -0400;
  • 6fb06d2 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:44:50 -0400;
  • 021b6fd (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:44:50 -0400;
  • df993db bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:28:34 +0000;
  • 8aa878f (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:28:34 +0000;
  • 77ca0d3 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:36:05 -0400;
  • 3617d67 (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:08:27 -0400;
  • ee817f3 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:10 -0400;
  • a143517 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:34 -0400;
  • 4582bae bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:30 -0400;
  • 846cf9e (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:48 -0400;
  • 457b53e Update DESCRIPTION, NAMESPACE, and vignette. by mccallm <mccallm@gmail.com> 2018-05-14 15:49:51 -0400;
  • f3dccc4 Initial rough merge of ternarynet and retnfit. by mccallm <mccallm@gmail.com> 2018-05-14 15:47:30 -0400;
  • ed5b225 Add David Burton and Harry Stern to package authors by mccallm <mccallm@gmail.com> 2018-05-14 13:40:59 -0400;
  • c0d9f2f bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:38 -0400;
  • 7834600 (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:23 -0400;
  • 61b2487 bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:52:13 -0400;
  • 0f685fb (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:39:38 -0400;
  • 4fa7568 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • 93e2a73 (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • f9d2c57 bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • 877a223 bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • bbb8395 (origin/RELEASE_3_4, RELEASE_3_4) Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • a258e19 bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • d1b2349 bump version after creating 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:30:44 +0000;
  • c1fb49b (origin/RELEASE_3_3, RELEASE_3_3) Creating branch for BioC 3.3 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:26:31 +0000;
  • 43df280 Bump versions prior to creation of 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:20:18 +0000;
  • 920b24f Bumped version number of all packages after creation of 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:59:53 +0000;
  • 2c5277e (origin/RELEASE_3_2, RELEASE_3_2) Creating branch for BioC 3.2 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:57:33 +0000;
  • d9578d0 Bumped versions of all packages prior to creating 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:36:05 +0000;
  • 303fd39 Bump versions in trunk after creation of 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:02:44 +0000;
  • 2d87705 (origin/RELEASE_3_1, RELEASE_3_1) Creating branch for BioC 3.1 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:00:01 +0000;
  • 3a055fc Bump versions prior to creating 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 19:42:01 +0000;
  • 25b4221 Fixed bug in tnetfuncs.cc by Matthew McCall <mmccall@jhsph.edu> 2014-11-17 19:18:13 +0000;
  • e847101 Bumping versions after creating 3.0 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:47:41 +0000;
  • 4933672 (origin/RELEASE_3_0, RELEASE_3_0) Creating branch for BioC 3.0 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:46:02 +0000;
  • 2c01e5c Bump package versions prior to creating the 3.0 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:38:33 +0000;
  • 383db3a Second version bump after creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:21:21 +0000;
  • 2dd9ed9 (origin/RELEASE_2_14, RELEASE_2_14) Creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:17:46 +0000;
  • 6dce078 First version bump prior to creating 2.14 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:07:21 +0000;
  • a42915e modify to new biocViews to DESCRIPTION file by Sonali Arora <sarora@fhcrc.org> 2014-03-04 22:12:21 +0000;
  • f91f56a rename inst/doc to vignettes and bump version by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-11-01 20:23:40 +0000;
  • 158f0f2 bump version after release branch has been created by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:47:19 +0000;
  • a925f64 (origin/RELEASE_2_13, RELEASE_2_13) Creating branch for BioC 2.13 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:43:43 +0000;
  • 499c066 bump versions prior to creating BioC 2.13 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:29:21 +0000;
  • 79c8b8f Added geneNames and experimentNames to ternaryFit and ternaryPost objects. Also fixed a related bug in plotFit. by Matthew McCall <mmccall@jhsph.edu> 2013-07-23 20:18:23 +0000;
  • d745d79 fixed minor bug in tnetfuncs.cc by Matthew McCall <mmccall@jhsph.edu> 2013-05-22 21:00:41 +0000;
  • 9bd64b7 altered default values in tnetpost by Matthew McCall <mmccall@jhsph.edu> 2013-05-22 04:19:22 +0000;
  • 485ae8b Bump y in version x.y.z to odd number in devel by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 22:06:11 +0000;
  • b2bcd20 (origin/RELEASE_2_12, RELEASE_2_12) Creating branch for BioC 2.12 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:56:22 +0000;
  • 4ba9730 bump y of x.y.z version number for BioC 2.12 release by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:32:27 +0000;
  • 0ac4a7e fixed bug in ternaryFit validity method by Matthew McCall <mmccall@jhsph.edu> 2013-03-05 17:19:42 +0000;
  • 99329d6 bump package versions after creating 2.11 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:43:56 +0000;
  • ae1ffbb (origin/RELEASE_2_11, RELEASE_2_11) Creating branch for BioC 2.11 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:37:11 +0000;
  • 623293e Bump all packages before creating 2.11 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:16:24 +0000;
  • 6d976c4 removed old plot-methods man page by Matthew McCall <mmccall@jhsph.edu> 2012-09-01 00:25:02 +0000;
  • 2076e17 added simulateSteadyState man page by Matthew McCall <mmccall@jhsph.edu> 2012-08-30 03:16:42 +0000;
  • 85795de fixed error in plotting functions by Matthew McCall <mmccall@jhsph.edu> 2012-08-30 03:14:35 +0000;
  • 7e2998a fixed plotting functions by Matthew McCall <mmccall@jhsph.edu> 2012-08-08 18:27:57 +0000;
  • bfad9aa updated help files to reflect recent changes by Matthew McCall <mmccall@jhsph.edu> 2012-08-08 16:08:10 +0000;
  • f0208a9 added plot and data simulation functions by Matthew McCall <mmccall@jhsph.edu> 2012-08-07 22:11:42 +0000;
  • 805ef8d added CITATION file by Matthew McCall <mmccall@jhsph.edu> 2012-08-04 17:51:17 +0000;
  • 6c69b8d added the getAttractor function to compute the attractor(s) for a given perturbation by Matthew McCall <mmccall@jhsph.edu> 2012-07-03 21:06:43 +0000;