1. sevenC
  2. Graph
Graph of sevenC
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  • d2926f6 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 10:28:00 -0400;
  • 2df2e79 (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 10:28:00 -0400;
  • dda512d bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:06:12 -0400;
  • 971b6f3 (origin/RELEASE_3_19, RELEASE_3_19) bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:06:12 -0400;
  • 737fe7b bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:05:00 -0400;
  • 3b7cf4e (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:05:00 -0400;
  • 6fc96ae bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:01:30 -0400;
  • 167f9bd (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:01:30 -0400;
  • 702f39d bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:17:44 -0400;
  • 15f39dd (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:17:44 -0400;
  • 01795c2 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:48:54 +0000;
  • f85ff45 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:48:54 +0000;
  • a0ad6f8 Pass serialized S4 instances thru updateObject() by Hervé Pagès <hpages.on.github@gmail.com> 2021-11-21 00:54:11 -0500;
  • 54e59bf bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:44:20 +0000;
  • df326ea (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:44:20 +0000;
  • 78f2d44 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:35:23 +0000;
  • 04cd8e5 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:35:23 +0000;
  • 8240ebd bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:34:59 -0400;
  • 5cd3589 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:34:59 -0400;
  • 117a604 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:16:17 +0000;
  • 4c63fa4 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:16:17 +0000;
  • 2baa047 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:43:06 -0400;
  • 206f5fd (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:11:09 -0400;
  • f50c7af bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:15:47 -0400;
  • 1ba9444 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:54:12 -0400;
  • 1fc2969 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:39 -0400;
  • 73bde3f (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:42:09 -0400;
  • f8bfb12 change maintainer e-mail and bump version by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-13 21:22:12 +0200;
  • c34d17c fix link to doc page for NumericList to AtomicList-class by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-13 21:21:25 +0200;
  • 3d288f9 remove deploy from .travis.yml by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-12 20:30:07 +0200;
  • 8e83bca fix .travis.yml with github path of pkgdown by Jonas Ibn-Salem <jonas.ibn-salem@gmx.de> 2018-10-12 10:57:41 +0200;
  • d9afc2a update .travis.yml with github version of pkgdown by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-11 22:34:42 +0200;
  • 3271750 update .travis.yml by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-11 20:41:46 +0200;
  • 6bfb7f8 use travis to deploy pkgdown site by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-10 23:26:44 +0200;
  • 6d1ad50 bump version by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-10 23:04:15 +0200;
  • bc70ab8 fix linking to help pages in doc by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-10 23:03:59 +0200;
  • b6555fa add badges by ibn-salem <jonas.ibn-salem@gmx.de> 2018-10-10 23:03:06 +0200;
  • 73e54c4 update install instructions by ibn-salem <jonas.ibn-salem@gmx.de> 2018-09-09 00:39:42 +0200;
  • 0a82f83 replace BiocInstaller biocLite mentions with BiocManager by LiNk-NY <mramos09@gmail.com> 2018-08-30 13:56:20 -0400;
  • ee47bbe bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:44 -0400;
  • 46d1c9d (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:51 -0400;
  • d4f8f69 bump version to 0.99.5 by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 17:57:14 +0200;
  • 7d73e24 add pkgdown-output to .gitignore by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 17:55:58 +0200;
  • 8a368be rm docs by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 17:32:29 +0200;
  • dddc5e3 bump version to 0.99.4 by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 17:02:17 +0200;
  • 4b0485d combine multiple stopifnot() calles into one by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 14:28:06 +0200;
  • a810a0c replace ifelse() by logical replacement by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 14:24:15 +0200;
  • c4aa6e2 replace 1:length(x) by seq_along(x) and lapply() by purrr::map() by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 14:17:32 +0200;
  • 4521c6c add paragraph for Windows users to vignettes by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-15 14:15:48 +0200;
  • 34130a9 rename parseLoopsTang2015() into parseLoopsTang() by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-11 20:34:02 +0200;
  • 71c64b7 update and reformat DESCRIPTION vignette by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-11 20:25:42 +0200;
  • a81498e fix citation by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-11 20:00:17 +0200;
  • 5cceda2 bump version by ibn-salem <jonas.ibn-salem@gmx.de> 2018-04-04 23:04:36 +0200;
  • 16b423c bump version to 0.99.2 by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-31 19:30:26 +0200;
  • 1cce1c1 allow parsing of .wig files on Windows by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-31 19:28:06 +0200;
  • 3d33613 change R dependancy from 3.4 to 3.5 for BioC submission by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-31 18:20:15 +0200;
  • 727c858 trigger new build on bioC by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-31 11:48:32 +0200;
  • 88a6d8e add CITATION file by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-30 20:00:26 +0200;
  • d4196ee update website by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-30 19:46:46 +0200;
  • 3b17dcb change range to 30Mb on chr22 for example ChIP-seq data by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-30 19:11:35 +0200;
  • c204bff update Description text by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-30 19:09:26 +0200;
  • 58da43e update README and vignette by ibn-salem <jonas.ibn-salem@gmx.de> 2018-03-30 18:05:29 +0200;
  • 00c9838 update title and re-build website by ibn-salem <jonas.ibn-salem@gmx.de> 2018-02-01 16:55:49 +0100;
  • 2d953ad add bioc to travis config by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-31 19:51:04 +0100;
  • 83e0970 add travis with codecov by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-31 19:42:15 +0100;
  • 899a1f5 add TF specific model parameter with documentation by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-25 14:58:04 +0100;
  • 8b7af94 update .gitignore by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 19:50:31 +0100;
  • 9b8a854 Delete hg19_MA0139.1.mrkv1.ms.gz by Jonas Ibn-Salem <j.ibn-salem@uni-mainz.de> 2018-01-24 19:48:58 +0100;
  • 9c81146 add hg19_MA0139.1.mrkv1.ms.gz to .gitignore by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 19:47:22 +0100;
  • 9c9929f bump version for biocCheck by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 19:41:40 +0100;
  • 97f0d22 fix example by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 19:41:06 +0100;
  • cc52dfe udpate default model parameters and documentation by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 18:57:50 +0100;
  • 0e4b6f8 update manual for CTCF motif data by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 18:17:09 +0100;
  • 6d6f594 use CTCF motif sites from JASPAR tracks as default and update scripts and tests accordingly by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 17:38:22 +0100;
  • 358c22c add CTCF motifs from JASPAR tracks as default data by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 16:51:06 +0100;
  • 24fae2a update man, doc and README by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 15:28:22 +0100;
  • 19670a9 update description and abstracts by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 15:25:53 +0100;
  • 2eeca29 rename package from "chromloop" into "sevenC" by ibn-salem <jonas.ibn-salem@gmx.de> 2018-01-24 15:08:36 +0100;
  • a4b1840 support parsing of wig files by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-27 18:13:25 +0100;
  • 69def61 add use and method parameter to addCovCor() function by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-21 20:29:36 +0100;
  • ed073ed fix example and doc by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-15 15:55:46 +0100;
  • 9e4b936 bump version to 0.99.16 by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-15 14:09:25 +0100;
  • 74d4197 fix addCovToGR() function by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-15 14:08:57 +0100;
  • 3d82d7a bump version to 0.99.15 by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-09 17:55:03 +0100;
  • 147b9e7 fix toy example description by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-09 17:54:18 +0100;
  • 52a914d fix parseLoopsRao() by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-07 17:12:36 +0100;
  • e06a0f0 rename prepareCandidates() into prepareCisPairs() by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-07 16:43:29 +0100;
  • 06927da update vignette and website; change default maxDist; bump version to 0.99.14 by ibn-salem <jonas.ibn-salem@gmx.de> 2017-11-01 17:33:23 +0100;
  • c750347 bump version to 0.99.13 by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-24 20:05:45 +0200;
  • 8a80158 update package website by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-24 20:05:10 +0200;
  • 3252e5c update vignette by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-24 19:07:52 +0200;
  • 5d5ab13 update README by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-24 17:22:55 +0200;
  • 6226d64 update doc and fix spellings by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-24 17:08:12 +0200;
  • daf5032 bump version by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-23 18:18:09 +0200;
  • 8059abb update website by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-23 18:16:57 +0200;
  • eff781b update vignette model building section by ibn-salem <jonas.ibn-salem@gmx.de> 2017-10-23 18:16:06 +0200;
  • 55aca1f prevent bigWig parsing in test-prediction.R by Jonas Ibn-Salem <j.ibn-salem@uni-mainz.de> 2017-10-20 20:56:00 +0200;
  • e58cda6 fix tests to exclude bigWig parsing on windows by Jonas Ibn-Salem <j.ibn-salem@uni-mainz.de> 2017-10-20 20:36:59 +0200;
  • 0aeedf7 bump version by Jonas Ibn-Salem <j.ibn-salem@uni-mainz.de> 2017-10-20 18:41:37 +0200;
  • ab9c77d bump version again by Jonas Ibn-Salem <j.ibn-salem@uni-mainz.de> 2017-10-20 16:42:41 +0200;