# scHOT: single-cell higher order testing
## Installation
Install the following packages using `BiocManager`:
```r
# install.packages("BiocManager")
BiocManager::install(c("S4Vectors", "SummarizedExperiment", "SingleCellExperiment",
"Matrix", "IRanges", "BiocParallel", "reshape", "ggplot2", "igraph", "grDevices", "ggforce"))
```
Then install `scHOT` using `devtools`:
```r
library(devtools)
devtools::install_github("shazanfar/scHOT")
```
## Vignette
You can find the vignette at this website: https://shazanfar.github.io/scHOT/.
