| ... | ... |
@@ -18,16 +18,15 @@ jobs: |
| 18 | 18 |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
|
| 19 | 19 |
CRAN: https://packagemanager.posit.co/cran/__linux__/jammy/latest |
| 20 | 20 |
QUARTO_VERSION: 1.4.551 |
| 21 |
- RETICULATE_PYTHON: /usr/bin/python3 |
|
| 22 | 21 |
|
| 23 | 22 |
steps: |
| 24 | 23 |
- name: Checkout Repository |
| 25 | 24 |
uses: actions/checkout@v3 |
| 26 | 25 |
|
| 27 |
- - name: Install python |
|
| 28 |
- uses: actions/setup-python@v5 |
|
| 29 |
- with: |
|
| 30 |
- python-version: '3.9' |
|
| 26 |
+# - name: Install python |
|
| 27 |
+# uses: actions/setup-python@v5 |
|
| 28 |
+# with: |
|
| 29 |
+# python-version: '3.9' |
|
| 31 | 30 |
|
| 32 | 31 |
- name: Install quarto |
| 33 | 32 |
run: | |
| ... | ... |
@@ -39,8 +38,6 @@ jobs: |
| 39 | 38 |
run: | |
| 40 | 39 |
BiocManager::install(ask=FALSE) |
| 41 | 40 |
BiocManager::install("magick")
|
| 42 |
- BiocManager::install("reticulate")
|
|
| 43 |
- reticulate::py_install("owlready2", pip=TRUE)
|
|
| 44 | 41 |
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) |
| 45 | 42 |
shell: Rscript {0}
|
| 46 | 43 |
|
