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README.md
<div align="center"> # geneXtendeR <img src="https://cloud.githubusercontent.com/assets/9893806/16898879/d14647c6-4bba-11e6-93d5-90bc802ac8e9.png"> ##### R/Bioconductor package for optimized functional annotation of ChIP-seq data ![AUR](https://img.shields.io/aur/license/yaourt.svg) [![Bioconductor Time](http://bioconductor.org/shields/years-in-bioc/geneXtendeR.svg)](http://bioconductor.org/packages/release/bioc/html/geneXtendeR.html "Bioconductor status") <!-- [![Bioconductor Downloads](http://bioconductor.org/shields/downloads/geneXtendeR.svg)](https://bioconductor.org/packages/stats/bioc/geneXtendeR/ "Percentile downloads") --> </div> To see `geneXtendeR` in action (and why you may want to use it as part of your next ChIP-seq workflow), see Section 1 of the [vignette](https://github.com/Bohdan-Khomtchouk/geneXtendeR/tree/master/inst/doc). ## Github installation instructions (for latest updated version) You can install the current GitHub version using the [devtools](https://github.com/hadley/devtools) package: ```R if (!require("devtools")) install.packages("devtools") devtools::install_github("Bohdan-Khomtchouk/geneXtendeR") ``` And then load the package: ```R library(geneXtendeR) ``` ## Bioconductor landing page (updated biannually -- so likely out-of-date) `geneXtendeR` can be found at: https://bioconductor.org/packages/geneXtendeR/. This URL will redirect to the release landing page of the package and is the URL that should be used (in publications, etc.) to refer to `geneXtendeR`. You can also refer specifically to the development, release, or specific numbered version of Bioconductor: https://bioconductor.org/packages/devel/geneXtendeR/ https://bioconductor.org/packages/release/geneXtendeR/ https://bioconductor.org/packages/3.8/geneXtendeR/ ## Bioconductor installation instructions ```R ## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("geneXtendeR") ``` ## Citation Coming soon!