Name Mode Size
R 040000
inst 040000
man 040000
tests 040000
vignettes 040000
DESCRIPTION 100644 2 kb
LICENSE 100644 0 kb
NAMESPACE 100644 0 kb
NEWS 100644 1 kb
README.md 100644 1 kb
TissueEnrich.Rproj 100644 0 kb
README.md
# TissueEnrich: R package to carry out tissue-specific gene enrichment. **Requirement** You need R version above 3.5 to run this application. Other dependencies are: * `dplyr (>= 0.7.3)` * `ensurer (>= 1.1)` * `ggplot2 (>= 2.2.1)` * `tidyr (>=0.8.0)` * `SummarizedExperiment (>= 1.6.5)` * `GSEABase (>= 1.38.2)` **How to install the R package** * Download or fork the bitbucket repository * Open R terminal or RStudio terminal * Install Dependencies * `install.packages(c("dplyr","ensurer","ggplot2","tidyr"))` * `install.packages("BiocManager")` * `BiocManager::install("SummarizedExperiment")` * `BiocManager::install("GSEABase")` * Now install the `devtools` package. * `install.packages(devtools)` * `library(devtools)` * Run command `install_github("Tuteja-Lab/TissueEnrich")` **More about the package** * Check more details about the package in the vignette `vignette("TissueEnrich")`