Bioconductor Code: TCGAutils

Graph of TCGAutils

8e4301d (HEAD -> devel, origin/devel, origin/HEAD) version bump 1.27.6 by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 18:28:38 -0500;
b42d93d re-use all() result by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 18:25:24 -0500;
1a5fc73 version bump 1.27.5 by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 18:17:17 -0500;
0eab66c deprecate the slides argument by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 18:17:13 -0500;
8e67976 version bump 1.27.4 by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 17:51:09 -0500;
abea43c filter first before creating data.frame in .unnest_df by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 17:50:35 -0500;
ca46382 fix typo by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 17:08:10 -0500;
72c5e95 version bump 1.27.3 by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 16:09:06 -0500;
39bdd96 use data from associated_entities and some from cases response by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-16 16:08:57 -0500;
1b53953 version bump 1.27.2 by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-11 11:59:31 -0500;
28f0cb4 update markdown in docs by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-11 11:59:22 -0500;
c1c02a4 resolve package anchor NOTEs by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-11 11:59:06 -0500;
2fa5a7b version bump 1.27.1 by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-11 10:29:26 -0500;
f5531a8 add metadata to svs slides API query by LiNk-NY <marcel.ramos@sph.cuny.edu> 2024-12-10 18:33:57 -0500;
e8f6f53 (origin/master) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 10:28:08 -0400;
c887e1a (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 10:28:08 -0400;
f3a9d26 version bump 1.25.1 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2024-08-22 15:36:24 -0400;
aa708e4 bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:06:18 -0400;
9707923 (origin/RELEASE_3_19, RELEASE_3_19) bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:06:17 -0400;
3c6f903 version bump 1.23.5 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2024-04-24 16:28:59 -0400;
d40070f update NEWS by LiNk-NY <marcel.ramosperez@roswellpark.org> 2024-04-24 16:28:56 -0400;
bba991f version bump 1.23.4 by LiNk-NY <marcel.ramos@roswellpark.org> 2024-02-22 15:56:16 +0000;
62e7894 more informative error, closes <a href="#34">#34</a> by LiNk-NY <marcel.ramos@roswellpark.org> 2024-02-22 15:56:06 +0000;
69c412a version bump 1.23.3 by LiNk-NY <marcel.ramos@roswellpark.org> 2024-01-24 12:48:48 -0500;
1e11487 convert Rd tags to roxygen2 markdown by LiNk-NY <marcel.ramos@roswellpark.org> 2024-01-24 12:48:42 -0500;
8c43d89 add make.names detail to getSubtypeMap helpers by LiNk-NY <marcel.ramos@roswellpark.org> 2024-01-24 12:27:33 -0500;
653217e (origin/RELEASE_3_18, RELEASE_3_18) version bump 1.22.2 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-12-08 11:45:35 -0500;
abdcd99 ensure query results are ordered when from_type is case_id by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-12-08 11:32:56 -0500;
7cd1def version bump 1.23.2 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-12-08 11:33:00 -0500;
82e56bc ensure query results are ordered when from_type is case_id by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-12-08 11:32:56 -0500;
918ad59 update NEWS by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-10-25 17:27:26 -0400;
c03318b version bump 1.23.1 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-10-25 17:20:47 -0400;
b387a68 remove defunct legacy argument by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-10-25 17:20:40 -0400;
0745723 version bump 1.22.1 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-10-25 16:57:12 -0400;
3df14f0 legacy arguments are defunct by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-10-25 16:57:01 -0400;
2e478ea bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:05:09 -0400;
e5807c0 bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:05:09 -0400;
86213d7 version bump 1.21.7 by LiNk-NY <marcel.ramos@roswellpark.org> 2023-10-19 15:16:06 -0400;
2a0d370 add temporary fix for tidyverse/vroom#519 by LiNk-NY <marcel.ramos@roswellpark.org> 2023-10-19 15:13:23 -0400;
b974280 remove BiocFileCache from Suggests and vignette by LiNk-NY <marcel.ramos@roswellpark.org> 2023-10-17 13:29:13 -0400;
dabd809 version bump 1.21.6 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-09-12 11:57:20 -0400;
77e93a1 update docs by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-09-12 11:56:59 -0400;
1a8fba2 type check index by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-09-12 11:48:08 -0400;
fbcae54 simplify code by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-09-12 11:43:48 -0400;
459bb80 (origin/RELEASE_3_17, RELEASE_3_17) version bump 1.20.4 by LiNk-NY <marcel.ramos@roswellpark.org> 2023-09-07 16:06:50 -0400;
cc56e19 add BiocBaseUtils to DESCRIPTION by LiNk-NY <marcel.ramos@roswellpark.org> 2023-09-07 16:06:47 -0400;
ab95e6a version bump 1.20.3 by LiNk-NY <marcel.ramos@roswellpark.org> 2023-09-05 16:56:52 -0400;
1eb406b avoid factors in UUIDtoBarcode by LiNk-NY <marcel.ramos@roswellpark.org> 2023-09-05 12:58:29 -0400;
8605c7d version bump 1.21.5 by LiNk-NY <marcel.ramos@roswellpark.org> 2023-09-05 16:41:55 -0400;
8b3d7c6 update NEWS.md by LiNk-NY <marcel.ramos@roswellpark.org> 2023-09-05 16:41:49 -0400;
f3a4c01 avoid factors in UUIDtoBarcode by LiNk-NY <marcel.ramos@roswellpark.org> 2023-09-05 12:58:29 -0400;
3947b00 version bump 1.21.4 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-07-03 17:29:32 -0400;
6133666 load BiocStyle for Biocpkg in vignette by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-07-03 17:29:29 -0400;
c65a5ac version bump 1.20.2 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-22 16:27:02 -0400;
40e104f avoid query to GDC for legacy data by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-22 16:22:44 -0400;
a39b805 deprecate legacy argument based on GDC by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-22 16:22:23 -0400;
c044844 version bump 1.21.3 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-22 16:22:56 -0400;
7dceae3 avoid query to GDC for legacy data by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-22 16:22:44 -0400;
39e8c19 deprecate legacy argument based on GDC by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-22 16:22:23 -0400;
e760d7a update NEWS by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-17 11:55:47 -0400;
b929743 update NEWS by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-17 11:55:47 -0400;
e1db876 version bump 1.20.1 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-17 11:13:02 -0400;
7f747ec remove makeGRangesListFromExonFiles example by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-17 11:12:07 -0400;
9189c02 version bump 1.21.2 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-17 11:12:16 -0400;
f9a0e74 remove makeGRangesListFromExonFiles example by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-05-17 11:12:07 -0400;
8548b42 version bump 1.21.1 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-04-28 17:14:25 -0400;
020d847 use BiocBaseUtils functions by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-04-28 17:14:21 -0400;
3779a46 remove defunct functions by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-04-28 17:14:06 -0400;
77d6474 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:01:38 -0400;
df9d125 bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:01:38 -0400;
a6a632e version bump 1.19.2 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-02-13 22:53:43 +0000;
ceccf62 update NEWS by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-02-13 22:53:36 +0000;
af844c5 mark functions defunct and remove code examples by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-02-13 22:53:30 +0000;
c164e20 update to new roxygen version by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-02-13 22:27:55 +0000;
2009451 update helpers doc by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-02-13 22:27:36 +0000;
b290ea6 move functions to defunct documentation by LiNk-NY <marcel.ramosperez@roswellpark.org> 2023-02-13 22:24:31 +0000;
81ebe29 version bump 1.19.1 by LiNk-NY <marcel.ramos@roswellpark.org> 2022-11-10 20:27:18 +0000;
9f0328f update documentation for clarity, closes <a href="#32">#32</a> by LiNk-NY <marcel.ramos@roswellpark.org> 2022-11-10 20:26:36 +0000;
758a022 Merged upstream/master into devel by LiNK-NY <mramos09@gmail.com> 2022-11-08 12:32:57 -0500;
b69f186 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:17:46 -0400;
04f65bf (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:17:46 -0400;
9da8b3c update NEWS.md by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-10-24 16:44:11 +0000;
a1f348c version bump 1.17.4 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-10-24 16:33:34 +0000;
d4ee801 use https instead of http in getFileName by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-10-24 16:33:30 +0000;
c707a87 (origin/RELEASE_3_15, RELEASE_3_15) version bump 1.16.1 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-10-11 17:11:53 +0000;
28c2159 resolve warnings regarding data obj usage in documentation by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-08-26 17:44:57 +0000;
9535e0a version bump 1.17.3 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-08-26 20:24:19 +0000;
111aca7 clean up based on BiocCheck by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-08-26 20:24:01 +0000;
7589ce1 Update Description field in DESCRIPTION by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-08-26 17:51:47 +0000;
5073613 avoid magrittr pipes and use native ones by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-08-26 17:46:58 +0000;
f544cae resolve warnings regarding data obj usage in documentation by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-08-26 17:44:57 +0000;
b661ce9 version bump 1.17.2 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-05-20 11:27:10 -0400;
dd53882 update qreduceTCGA docs by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-05-20 11:26:56 -0400;
d1f61f6 version bump 1.17.1 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-05-19 20:17:59 -0400;
f4c478c warn when sample names not mappable with colnames; assay dropped by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-05-19 20:17:40 -0400;
46b4a43 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:49:00 +0000;
e4e2892 bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:49:00 +0000;
01593bf version bump 1.15.15 by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-04-22 10:20:07 -0400;
c2c9717 remove duplicate by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-04-22 10:20:02 -0400;
1f84571 Merge branch 'devel' of github.com:waldronlab/TCGAutils into devel by LiNk-NY <marcel.ramosperez@roswellpark.org> 2022-04-22 10:19:07 -0400;