1. Spaniel
  2. Graph
Graph of Spaniel
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • |\
  • * \
  • |\ \
  • | | *
  • | | *
  • | | |\
  • | | * |
  • | | * |
  • | | | *
  • | | | *
  • | | | *
  • * | | |
  • * | | |
  • | | | *
  • | | |/
  • | * |
  • | * |
  • | * |
  • | * |
  • | | *
  • | | *
  • | | *
  • | | |\
  • | | | *
  • | | | *
  • | | | *
  • | | | *
  • | |_|/
  • |/| |
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | |\
  • | | * |
  • | | | *
  • | | * |
  • | | |/
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | | *
  • | |/
  • |/|
  • | *
  • | *
  • | *
  • * |
  • |/
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • b316159 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 10:40:19 -0400;
  • 74635a7 (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 10:40:19 -0400;
  • c27a0c1 bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:17:35 -0400;
  • d05a808 (origin/RELEASE_3_19, RELEASE_3_19) bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 11:17:35 -0400;
  • 28eec4b bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:16:38 -0400;
  • 77e9ee3 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:16:38 -0400;
  • 9e1cd03 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:12:36 -0400;
  • 4ccdb15 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:12:36 -0400;
  • a901cba bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:20:34 -0400;
  • 9f51311 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:20:34 -0400;
  • 8c05325 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:59:27 +0000;
  • 957db89 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:59:27 +0000;
  • 77edc5c bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:54:30 +0000;
  • 4a69e26 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:54:30 +0000;
  • 19d86dc bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:46:26 +0000;
  • 6303e34 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:46:26 +0000;
  • 796a3f5 version bump by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-18 09:24:41 +0100;
  • ee4c476 change imports to fix warning message by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-17 09:18:46 +0100;
  • 224f3e4 add NEWS for version 1.5.0 by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-14 10:13:17 +0100;
  • 4125812 changed version number by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-13 15:57:59 +0100;
  • 1cd5f49 biocChecks by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-13 15:46:32 +0100;
  • 4833ac0 R checks pass by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-13 13:46:12 +0100;
  • 570b3e7 add usuage arguments spanielplot by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-13 11:40:06 +0100;
  • 43b5097 change examples to sce objects by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-13 11:23:40 +0100;
  • 711a0d5 remove original ST example and replace with visium by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-13 10:16:38 +0100;
  • bb1bb99 resolve conflicts by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-11 14:14:45 +0100;
  • 0303dbc Merge remote-tracking branch 'upstream/master' by Rachel Queen <rachel.queen@newcastle.ac.uk> 2021-05-11 11:53:35 +0100;
  • a3a1f5a Update index.html by Rachel Queen <nrq2@newcastle.ac.uk> 2020-11-24 09:58:56 +0000;
  • 9028cd0 Merge branch 'Development' of https://github.com/RachelQueen1/Spaniel into Development by Rachel Queen <nrq2@newcastle.ac.uk> 2020-11-24 09:43:51 +0000;
  • 5cd5d56 Update index.html by Rachel Queen <nrq2@newcastle.ac.uk> 2020-11-24 09:43:43 +0000;
  • 71ed60c get github changes by Rachel Queen <nrq2@newcastle.ac.uk> 2020-11-24 09:40:51 +0000;
  • 65f356e Update spaniel-vignette-tenX-import.Rmd by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-11-24 09:36:37 +0000;
  • 4cd39fa Update spaniel-vignette-tenX-import.Rmd by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-11-24 09:35:22 +0000;
  • d6153f5 Update README.md by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-11-24 09:26:03 +0000;
  • 7704933 Update README.md by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-11-24 09:25:27 +0000;
  • d2a3c7f Update README.md by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-11-24 09:25:06 +0000;
  • 3e9c548 Update README.md by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-11-24 09:14:01 +0000;
  • bfa5c42 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:49:34 -0400;
  • 18f2c89 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:49:34 -0400;
  • e2485a3 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:30:44 +0000;
  • 2af801b (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:30:44 +0000;
  • cfe6b1c update documentation by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-03-03 14:03:29 +0000;
  • 3adad77 checks complete by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-02-19 16:38:53 +0000;
  • 41b2d66 resolve conflicts by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-02-19 11:57:55 +0000;
  • bc6ab50 resolve conflicts by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-02-19 11:30:58 +0000;
  • 15d95da Resolve conflicts by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-02-19 11:26:43 +0000;
  • 06bd9ed Resolve conflicts by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-02-19 11:25:37 +0000;
  • 331821e 10X updates by Rachel Queen <nrq2@newcastle.ac.uk> 2020-02-19 11:00:12 +0000;
  • 3704051 changes to imports by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-02-17 16:29:32 +0000;
  • 03d9b6d New function to add coordinates from Spot Detector to Object by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-01-10 14:44:36 +0000;
  • a67b596 correct pixel coordinates for plotting by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-01-10 12:31:30 +0000;
  • 4eca345 fix for plotting original ST image by coordinates by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-01-09 17:42:39 +0000;
  • 3bf8763 require image dimensions when plotting by coordinates by RachelQueen1 <rachel.queen@ncl.ac.uk> 2020-01-09 17:03:47 +0000;
  • 9ba2f76 correct typos by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 16:14:42 +0000;
  • 497925e Merge branch 'Dev' of https://github.com/RachelQueen1/Spaniel into Dev by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 15:35:30 +0000;
  • bca2e69 name change by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 15:35:26 +0000;
  • 3b72ae5 update readme by RachelQueen1 <rachel.queen@ncl.ac.uk> 2019-12-20 15:32:51 +0000;
  • 4738d4f add new vignette by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 15:29:49 +0000;
  • e991c50 update documentation by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 15:27:04 +0000;
  • 99590b0 plot byt coordinate option by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 15:22:00 +0000;
  • 5375e50 title change by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 15:21:48 +0000;
  • fd146a7 Update spaniel-vignette-tenX-import.Rmd by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 15:13:11 +0000;
  • 2863093 add test data by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 14:56:20 +0000;
  • e9e0268 short vignette for using 10X import by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 14:47:39 +0000;
  • 8c639bd add imgDims for plotting by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 12:10:38 +0000;
  • 191a642 add by coordinates option for plotting by Rachel Queen <nrq2@newcastle.ac.uk> 2019-12-20 11:57:48 +0000;
  • 0fe2350 add option to plot visium or by coordinates by nrq2 <rachel.queen@ncl.ac.uk> 2019-12-19 17:07:55 +0000;
  • 792d654 create an import function for Visium by nrq2 <rachel.queen@ncl.ac.uk> 2019-12-19 16:43:40 +0000;
  • c5c22e1 option to import visium data by nrq2 <rachel.queen@ncl.ac.uk> 2019-12-19 16:41:35 +0000;
  • 5c53f42 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:43:42 -0400;
  • a0ddb42 (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:12:05 -0400;
  • 856cf69 addPer*QC() functions were renamed in scater 1.13.27 by Hervé Pagès <hpages@fredhutch.org> 2019-10-18 14:44:16 -0700;
  • f757f22 Update README.md by RachelQueen1 <rachel.queen@ncl.ac.uk> 2019-10-04 09:40:35 +0100;
  • 6dada98 Add the Bioconductor way of installing the package in the vigneette by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-25 15:09:30 +0100;
  • 22acc4d fix example for remove spots documentation by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-25 14:52:31 +0100;
  • 282152c correct example in removeSpots by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-25 13:48:31 +0100;
  • 58f4553 change parameter names in removeSpots function by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-25 13:30:20 +0100;
  • 35ef0b5 version bump by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-25 10:26:44 +0100;
  • eda270a add formatting to vignette by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 16:22:08 +0100;
  • dbed717 change getexrs to getExprs by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 16:11:43 +0100;
  • a868e7b make variable names consistent by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 15:49:03 +0100;
  • b83ad89 change ST_plot to spanielPlot by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 13:54:53 +0100;
  • 2323a14 revert to devtools way of installation by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 12:16:17 +0100;
  • cfaa56d revert to devtools way of installation by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 11:30:15 +0100;
  • 23af5a9 revert to devtools way of installation by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 11:07:29 +0100;
  • 87fc110 change ST_plot to spanielPlot by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 10:52:18 +0100;
  • b9abfd4 version bump by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 10:33:34 +0100;
  • d8a5e9d change function names to from readSeurat and readSCE to createSeurat and createSCE by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 10:24:18 +0100;
  • 4e527b3 Add the Bioconductor way of installing the package in the vignette by nrq2 <rachel.queen@ncl.ac.uk> 2019-09-24 10:04:48 +0100;
  • 1569645 remove remove tmp file option from example by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-27 11:59:42 +0100;
  • 7588d1d Version bump by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-27 11:44:39 +0100;
  • 570dde6 update documentation by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-27 11:40:48 +0100;
  • b709d10 version bump by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-27 11:03:57 +0100;
  • 7d0df35 fix indentation in Description by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-27 11:01:45 +0100;
  • fd528c1 fix typo by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-27 10:52:16 +0100;
  • 4de2b51 remove dead code, update description and add version number ot scater by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-27 10:40:13 +0100;
  • a9ecd6d update version by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-15 13:52:36 +0100;
  • a8f8c83 change calculateQCMetrics to addQCPerCell by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-15 12:12:29 +0100;
  • 0da4aab fix typo and update version by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-15 09:47:22 +0100;
  • 891cdca remove supress messages and update version by nrq2 <rachel.queen@ncl.ac.uk> 2019-08-15 09:39:47 +0100;