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vignettes 040000
.Rbuildignore 100644 0 kb
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DESCRIPTION 100644 2 kb
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# RNAmodR.AlkAnilineSeq [![Build Status](]( [![codecov](]( `RNAmodR.AlkAnilineSeq` uses classes and workflows from `RNAmodR` to detect `m7G`, `m3C` and `D` in RNASeq data specifically treated according to the AlkAnilineSeq protocol. The vignette from the `RNAmodR.AlkAnilineSeq` package provides details on the specific analysis of AlkAnilineSeq data. Have a look at the vignette from the `RNAmodR` package for a general description on the provided workflows. # Installation The current version of the RNAmodR.AlkAnilineSeq package is available from Bioconductor. ``` if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("RNAmodR.AlkAnilineSeq") library(RNAmodR.AlkAnilineSeq) ``` # Literature - Marchand, Virginie, Lilia Ayadi, __Felix G. M. Ernst__, Jasmin Hertler, Valérie Bourguignon-Igel, Adeline Galvanin, Annika Kotter, Mark Helm, __Denis L. J. Lafontaine__, and Yuri Motorin. 2018. “AlkAniline-Seq: Profiling of m7G and m3C Rna Modifications at Single Nucleotide Resolution.” Angewandte Chemie International Edition 57 (51): 16785–90.