# GEOexplorer
GEOexplorer is an R/Bioconductor package and web application
that enables users to perform gene expression analysis.
## Acknowledgements
The development of GEOexplorer was made possible because of the
excellent code provided by GEO2R
(https://www.ncbi.nlm.nih.gov/geo/geo2r/).
## Web application
GEOexplorer is also available as a website on the following link:
https://geoexplorer.rosalind.kcl.ac.uk/
## Installation
Use the devtools install_github function for installation e.g.
```R
if (!requireNamespace("devtools", quietly = TRUE))
install.packages("devtools")
devtools::install_github("guypwhunt/GEOexplorer")
```
Or install from BioConductor
```R
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GEOexplorer")
```
## Usage
```R
library(GEOexplorer)
loadApp()
```
## Contributing
Pull requests are welcome.
For any changes or issues, please open an issue to discuss what you
would like to change.
## License
[GPL-3](https://choosealicense.com/licenses/gpl-3.0/)
## Authors
Guy Hunt with contributions from Fabrizio Smeraldi, Michael Barnes
and Rafael Henkin.
## Future Updates
Please see our Google [doc](https://docs.google.com/spreadsheets/d/14UW_-9pLbqJsh5pYUcSy2hE9CZCJ1nw5o5izuqo-fOw/edit?usp=sharing) for the planned feature updates.
