Bioconductor Code: DeepTarget

Graph of DeepTarget

3398b5d (HEAD -> devel, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 11:31:51 -0400;
5e2d027 (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 11:31:51 -0400;
bd7ae7d Fix bugs for Window Server- 0.99.26 by Trinh Nguyen <11201085+CBIIT-CGBB@users.noreply.github.com> 2024-10-21 10:03:16 -0400;
806fbf1 version bump in devel by Trinh Nguyen <11201085+CBIIT-CGBB@users.noreply.github.com> 2024-10-18 09:23:18 -0400;
8cc649c Resolve build issue of window Server- adding a line BiocParallel::register(SerialParam()) in DoPWY.R by Trinh Nguyen <11201085+CBIIT-CGBB@users.noreply.github.com> 2024-10-17 14:53:39 -0400;
ecc6f59 typo errors by Trinh Nguyen <11201085+CBIIT-CGBB@users.noreply.github.com> 2024-10-16 13:50:54 -0400;
0fe38fc shorten the description and adding the selection of unique genes for fgsea by Trinh Nguyen <11201085+CBIIT-CGBB@users.noreply.github.com> 2024-10-16 13:25:42 -0400;
1276c80 Adding reminder of license by CBIIT-CGBB <yhu@mail.nih.gov> 2024-07-09 10:56:01 -0400;
855ee75 Adding reminder of license by CBIIT-CGBB <yhu@mail.nih.gov> 2024-07-09 10:41:33 -0400;
4aeabe6 Adding reminder of license by CBIIT-CGBB <yhu@mail.nih.gov> 2024-07-09 10:40:24 -0400;
4eac6df adding information about requesting users to agree to the terms and conditions of DepMap portal by CBIIT-CGBB <yhu@mail.nih.gov> 2024-07-08 17:07:25 -0400;
c151b95 Fixing errors generating from build report by CBIIT-CGBB <yhu@mail.nih.gov> 2024-04-23 11:14:21 -0400;
303808d updating version from 0.99.18 to 0.99.19 to fix error Biobase,BiocGenerics, BiocParallel, Biobase during the build by CBIIT-CGBB <yhu@mail.nih.gov> 2024-04-23 09:39:28 -0400;
ad43398 updating version from 0.99.17 to 0.99.18 by CBIIT-CGBB <yhu@mail.nih.gov> 2024-04-19 16:00:41 -0400;
0b53fff updating version from 0.99.16 to 0.99.17 by CBIIT-CGBB <yhu@mail.nih.gov> 2024-03-27 16:59:32 -0400;
4cb8f40 Update Depmap2DeepTarget by CBIIT-CGBB <yhu@mail.nih.gov> 2024-03-27 12:40:48 -0400;
7b1b600 updating version from 0.99.15 to _0.99.16 by CBIIT-CGBB <yhu@mail.nih.gov> 2024-03-27 12:12:37 -0400;
a67239e updating version from 0.99.15 to _0.99.16 by CBIIT-CGBB <yhu@mail.nih.gov> 2024-03-27 12:11:50 -0400;
e80d2b1 updating version from 0.99.15 to _0.99.16 by CBIIT-CGBB <yhu@mail.nih.gov> 2024-03-27 12:11:35 -0400;
70ca827 adding doi by CBIIT-CGBB <yhu@mail.nih.gov> 2024-02-23 13:46:21 -0500;
9526332 adding doi by CBIIT-CGBB <yhu@mail.nih.gov> 2024-02-23 13:45:13 -0500;
cf89dce updating required functions for newly added function by CBIIT-CGBB <yhu@mail.nih.gov> 2024-02-23 12:57:11 -0500;
1ba3bd4 adding Depmap2DeepTarget function for data retrieval and preparation as input for DeepTarget by CBIIT-CGBB <yhu@mail.nih.gov> 2024-02-23 12:54:59 -0500;
26dac9e adding Depmap2DeepTarget function for data retrieval and preparation as input for DeepTarget by CBIIT-CGBB <yhu@mail.nih.gov> 2024-02-23 12:54:09 -0500;
6d1b274 updating version from 0.99.13 to 0.99.14: Adding function to retrieve data directly from Depmap and then do preprocessing when applicable by CBIIT-CGBB <yhu@mail.nih.gov> 2024-02-23 12:51:17 -0500;
2a9d4d0 bump version by CBIIT-CGBB <yhu@mail.nih.gov> 2023-11-30 16:16:45 -0500;
d4251e0 remove hidden files by CBIIT-CGBB <yhu@mail.nih.gov> 2023-11-30 16:13:42 -0500;
f8c540c updating version from 0.99.11 to 0.99.12 by CBIIT-CGBB <yhu@mail.nih.gov> 2023-11-30 15:48:35 -0500;
8dff0e9 updating recommendations and requirements from reviewer by CBIIT-CGBB <yhu@mail.nih.gov> 2023-11-30 14:57:44 -0500;
0da39ce update README.md by CBIIT-CGBB <yhu@mail.nih.gov> 2023-11-30 14:44:48 -0500;
6f767c7 adding NEWS.md by CBIIT-CGBB <yhu@mail.nih.gov> 2023-11-30 14:18:31 -0500;
3ff5046 Delete DeepTarget directory by Trinh Nguyen <lovsmalgir@yahoo.com> 2023-11-30 12:22:47 -0500;
dd842fb revised and fixed following reviewer's requirement and recomendation by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-11-30 11:15:50 -0500;
12803e4 updating version from 0.99.10 to 0.99.11 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-15 14:02:56 -0400;
6777483 updating version from 0.99.9 to 0.99.10 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-12 16:29:23 -0400;
73daa5c updating version from 0.99.9 to 1.0.0 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-12 16:26:14 -0400;
9c0a3a8 updating version from 0.99.8 to 0.99.9 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-12 16:00:02 -0400;
900376f submit to Bioconductor by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-12 15:14:16 -0400;
6e07d34 rmv hidden files and update documentation files by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-12 15:08:56 -0400;
3530818 updating version from 0.99.6 to 0.99.9 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-12 15:04:39 -0400;
063f9e2 updating version from 0.99.7 to 0.99.8 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 13:34:23 -0400;
91aec0a testing by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 13:21:55 -0400;
5be31f6 testing by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 13:15:24 -0400;
59dbae2 checking error by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 13:04:18 -0400;
4e54a39 updating version from 0.99.6 to 0.99.7 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 12:29:53 -0400;
9593d54 remove note where the script comes from by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 12:28:08 -0400;
7607da8 updating version from 0.99.5 to 0.99.6 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 12:14:15 -0400;
29e5db0 notes, warning fixed by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 11:48:07 -0400;
659527d notes, warning fixed by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 11:47:25 -0400;
5e94d43 updating version from 0.99.4 to 0.99.5 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-09-08 11:42:05 -0400;
dbb96cf updating version from 0.99.2 to 0.99.3 and rm author line by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-29 12:32:05 -0400;
393fae3 updating version from 0.99.2 to 0.99.3 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-29 12:12:19 -0400;
4b62248 remove hidden folder .Rproj.user by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-29 12:07:39 -0400;
fff0c3e remove hidden files by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-29 12:01:19 -0400;
2b99f7f updating version from 0.99.1 to 0.99.2 by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-29 11:05:36 -0400;
5467225 removing saved files in V_analysis.Rmd by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-29 10:27:47 -0400;
58b0cf3 from Version: 0.99.0 to Version: 0.99.1 by Trinh Nguyen <yhu@mail.nih.gov> 2023-08-18 14:15:45 -0400;
d10a232 Fix the name by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-09 15:08:17 -0500;
1a0aa2b Registration for maintainer. by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-09 14:56:35 -0500;
f5889a0 addressing error from V_analyses.Rmd by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-08-09 10:48:54 -0500;
a8ec764 Delete .DS_Store by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-28 16:25:30 -0400;
cc601d8 Merge branch 'master' of https://github.com/CBIIT-CGBB/DeepTarget by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-28 16:22:59 -0400;
c841774 adding VigneetteBuilder in the desccription; fix the errors;R CMD build; R CMD check by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-28 16:22:41 -0400;
d8879a3 Update README.md by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 16:25:12 -0400;
b455bb9 Update README.md by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 16:25:00 -0400;
c954f64 Update README.md by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 16:24:21 -0400;
2eaa568 Update README.md by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 16:12:19 -0400;
50178e7 Update README.md by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 16:10:37 -0400;
6bd5def Delete .DS_Store by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 15:46:09 -0400;
0913cc7 Delete .DS_Store by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 15:45:48 -0400;
bd726ad Delete .Rbuildignore by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 15:45:04 -0400;
c826a9f Delete .gitignore by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 15:44:55 -0400;
378c8db Update according to bioconductor's guidelines by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 15:32:05 -0400;
231a03d remove user guide by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 15:27:03 -0400;
bc8051e adding 'EGFR' gene by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-16 15:26:02 -0400;
7852b2c Delete .Rprofile by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-15 13:00:58 -0400;
69d3064 Delete .DS_Store by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-15 12:59:31 -0400;
31b51d5 Delete renv.lock by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-15 12:58:43 -0400;
74c6f57 Delete DeepTarget.Rproj by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-06-15 12:57:44 -0400;
20bb915 remove unnessary lines and update some notes from Greg by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-23 11:08:03 -0400;
f4a02df Update a subset of data by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-23 11:03:58 -0400;
ae824b0 Merge branch 'master' of https://github.com/CBIIT-CGBB/DeepTarget by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-23 11:03:13 -0400;
6d7591a Delete .DS_Store by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-20 15:22:03 -0400;
cc5ea51 Delete .DS_Store by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-20 15:22:03 -0400;
02e756a Delete Example/Result directory by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-20 15:21:47 -0400;
2867e70 Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-20 15:17:42 -0400;
4c9dad9 Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 18:41:43 -0400;
9c8e78c Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 18:38:59 -0400;
5d02b1b Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 18:31:09 -0400;
52e66a3 Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 18:25:53 -0400;
c7cd3fc Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 18:15:51 -0400;
ff5215c Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 18:12:15 -0400;
fb3a533 Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 17:50:22 -0400;
daccdd9 Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 17:35:09 -0400;
75b9aaa Update DESCRIPTION by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 17:13:55 -0400;
e7599b1 Add files via upload by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 17:04:30 -0400;
417a9cb Create Note for user manual by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 16:23:10 -0400;
6b7fd24 Delete Doc by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 16:22:27 -0400;
9142b11 Create Doc folder for User Manual by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-19 16:21:35 -0400;
b8dbe12 Update ExWorkflow.R by Trinh Nguyen <50640811+TrinhNguyenP@users.noreply.github.com> 2023-05-12 16:43:13 -0400;