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DESCRIPTION 100644 1 kb
NAMESPACE 100644 1 kb
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README.md 100644 1 kb
README.md
# CardinalIO ## Mass spectrometry imaging i/o This package provides fast and efficient parsing, reading, and writing of imzML files for mass spectrometry imaging experiments. ## Installation ### Bioconductor Release *CardinalIO* can be installed via the *BiocManager* package. ```{r install, eval=FALSE} if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("CardinalIO") ``` The same function can be used to update *CardinalIO* and other Bioconductor packages. Once installed, *CardinalIO* can be loaded with `library()`: ```{r library, eval=FALSE} library(CardinalIO) ``` ### Bioconductor Devel The Bioconductor development version of *CardinalIO* can also be installed via the *BiocManager* package. ```{r install, eval=FALSE} BiocManager::install("CardinalIO", version="devel") ``` This version is unstable and should not be relied on for critical work. However, it is typically more stable than Github version. ### Github Devel The most cutting edge version of *CardinalIO* can be installed from Github via the *remotes* package. ```{r install, eval=FALSE} if (!require("remotes", quietly = TRUE)) install.packages("remotes") remotes::install_github("kuwisdelu/CardinalIO") ``` This version is unstable and only recommended for developers.