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fixes to cope with GOSemSim package update

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/tRanslatome@121785 bc3139a8-67e5-0310-9ffc-ced21a209358

Erik Dassi authored on 05/10/2016 07:41:10
Showing 1 changed files

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@@ -360,7 +360,7 @@ specificOntologyResult <- function(object, ontology) {
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 comparisonBetweenTwoLists <- function(go1,go2,ontology,direction) {
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-	ontData <- semData('org.Hs.eg.db', ont=ontology)
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+	ontData <- godata('org.Hs.eg.db', ont=ontology)
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 	finalmat <- NULL
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 	for (i in 1:nrow(go1)) {
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 		mat <- NULL