Name Mode Size
import.tRNAdb.Rd 100644 3 kb
istRNAdbGRanges.Rd 100644 1 kb
open_tdbID.Rd 100644 1 kb
tRNAdbImport.Rd 100644 1 kb
# tRNAdbImport <img src="" height="200" align="right"> <!-- badges: start --> [![R-CMD-check](]( [![Build Status](]( [![BioC Build](]( [![codecov](]( [![BioC Years](]( <!-- badges: end --> The tRNAdb and mttRNAdb ([Juehling et al. 2009](#Literature)) is a compilation of tRNA sequences and tRNA genes. It is a follow up version of the database of [Sprinzl et al. (2005)](#Literature). Using `tRNAdbImport` the tRNAdb can be accessed as outlined on the website []( directly via R. The results are returned as a `GRanges` object and can be further used in a BioC context. # Installation The current version of the `tRNAdbImport` package is available from Bioconductor. ```{r} if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("tRNAdbImport") # Load and attach the package library("tRNAdbImport") ``` ## Literature - Jühling, Frank; Mörl, Mario; Hartmann, Roland K.; Sprinzl, Mathias; Stadler, Peter F.; Pütz, Joern (2009): "TRNAdb 2009: Compilation of tRNA Sequences and tRNA Genes." Nucleic Acids Research 37 (suppl_1): D159–D162. doi:[10.1093/nar/gkn772]( - Sprinzl, Mathias; Vassilenko, Konstantin S. (2005): "Compilation of tRNA Sequences and Sequences of tRNA Genes." Nucleic Acids Research 33 (suppl_1): D139–D140. doi:[10.1093/nar/gki012](