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  • 155650a (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:50:36 -0400;
  • 3c6c084 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:50:36 -0400;
  • 26ad5c6 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:23:28 -0400;
  • 4f56c52 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:23:28 -0400;
  • c4dc7ee bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:07:08 -0400;
  • 948d05b (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:07:08 -0400;
  • 89c39be (origin/RELEASE_3_15, RELEASE_3_15) fix issue with vignette - see <a href="#139">#139</a> by Laurent Gatto <laurent.gatto@uclouvain.be> 2022-09-27 13:13:14 +0200;
  • e827219 fix issue with vignette - see <a href="#139">#139</a> by Laurent Gatto <laurent.gatto@uclouvain.be> 2022-09-27 13:11:34 +0200;
  • d06a018 re-import import render by lgatto <laurent.gatto@gmail.com> 2022-09-27 13:08:23 +0200;
  • 0f0f618 try to fix vignette issues - see <a href="#139">#139</a> by lgatto <laurent.gatto@gmail.com> 2022-09-27 11:00:42 +0200;
  • e4917b1 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:11:28 +0000;
  • dd54af2 bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:11:28 +0000;
  • 6ff5122 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:03:45 +0000;
  • 1ee8f37 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:03:45 +0000;
  • 53de65a put back commented chunk by lgatto <laurent.gatto@gmail.com> 2021-10-26 00:31:42 +0200;
  • ad60512 update vignette by Laurent Gatto <laurent.gatto@uclouvain.be> 2021-10-21 07:25:35 +0200;
  • f405af9 Merge branch 'devel' by Laurent Gatto <laurent.gatto@uclouvain.be> 2021-09-14 15:46:06 +0200;
  • 3e9624f update email by Laurent Gatto <laurent.gatto@uclouvain.be> 2021-09-14 15:45:42 +0200;
  • 98fc772 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:53:00 +0000;
  • 93006a2 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:52:59 +0000;
  • 0bb4118 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:46:22 -0400;
  • 8cbfb2c (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:46:22 -0400;
  • d8dd48e bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:30:17 +0000;
  • 338ea52 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:30:17 +0000;
  • b2a6c61 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:36:16 -0400;
  • 7316aec (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:08:32 -0400;
  • 8b1c194 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:13 -0400;
  • d014514 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:37 -0400;
  • 5842d97 Fix NEWS formatting by lshep <lori.shepherd@roswellpark.org> 2019-04-22 11:10:44 -0400;
  • 0dcf262 (origin/RELEASE_3_8, RELEASE_3_8) Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:12:41 -0500;
  • 027a0f4 Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:12:35 -0500;
  • 5a107db Merge branch 'devel' by Laurent Gatto <laurent.gatto@uclouvain.be> 2018-11-06 08:31:08 +0100;
  • 1ee081b bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:30 -0400;
  • 1792a3a bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:49 -0400;
  • 24c0b7b provide more time for checking by Laurent <lg390@cam.ac.uk> 2018-09-03 14:32:27 +0200;
  • 95e8644 no docs on bioc by Laurent <lg390@cam.ac.uk> 2018-09-03 12:29:28 +0200;
  • c9bb14e remove superflous file by Laurent <lg390@cam.ac.uk> 2018-09-03 12:28:54 +0200;
  • f40a84f update docs by Laurent <lg390@cam.ac.uk> 2018-09-03 12:26:29 +0200;
  • 0acafb4 update news by Laurent <lg390@cam.ac.uk> 2018-09-03 11:56:39 +0200;
  • f77f55a Rerun pkgdown by Sebastian Gibb <mail@sebastiangibb.de> 2018-07-16 21:03:04 +0200;
  • 113b98e Use BiocManager::install by Sebastian Gibb <mail@sebastiangibb.de> 2018-07-16 21:01:45 +0200;
  • f1677bc Merge remote-tracking branch 'upstream/master' by Sebastian Gibb <mail@sebastiangibb.de> 2018-07-16 20:24:38 +0200;
  • 3911092 (origin/RELEASE_3_7, RELEASE_3_7) Version bump for BiocStyle update by lshep <shepherl@gmail.com> 2018-05-23 09:18:48 -0400;
  • 6310ff2 Version bump for BiocStyle update by lshep <shepherl@gmail.com> 2018-05-23 09:13:11 -0400;
  • 9de7029 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:38 -0400;
  • 6599cd2 bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:25 -0400;
  • b69c0ed Bump github devel version by Sebastian Gibb <mail@sebastiangibb.de> 2018-01-18 08:36:32 +0100;
  • bd1c294 Fix charges argument in .requantifyTheoreticalDistribution by Sebastian Gibb <mail@sebastiangibb.de> 2018-01-17 21:43:30 +0100;
  • a18bcd4 Use instead of by Sebastian Gibb <mail@sebastiangibb.de> 2018-01-17 21:31:25 +0100;
  • e57f0aa Merge remote-tracking branch 'upstream/master' by Sebastian Gibb <mail@sebastiangibb.de> 2018-01-17 21:24:02 +0100;
  • bcb4f99 bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:52:20 -0400;
  • 3c52d85 (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:39:44 -0400;
  • 68c480d bump version and update NEWS.md by Sebastian Gibb <mail@sebastiangibb.de> 2017-05-29 21:03:15 +0200;
  • b41a33d partly revert 95f4094, because MSnbase:::utils.applyColumnwiseByGroup is gone by Sebastian Gibb <mail@sebastiangibb.de> 2017-05-29 20:55:48 +0200;
  • e146d72 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • 0c415f6 (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • c8e0955 bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • 331e3ee remove travis badge for 2.0 branch [ci skip] by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-19 13:08:12 +0200;
  • c813e3a Merge branch 'master' into devel by Laurent Gatto <l.gatto@dnavision.be> 2017-04-19 09:18:39 +0000;
  • 6613b5b update show,MasterPeptides to check of there's a fragmentlibrary slot before trying to access it by Laurent <lg390@cam.ac.uk> 2017-04-19 10:17:34 +0100;
  • b995e50 Merge branch 'master' into devel by Laurent Gatto <l.gatto@dnavision.be> 2017-04-11 16:05:21 +0000;
  • 8a5c395 add news back by Laurent <lg390@cam.ac.uk> 2017-04-11 17:04:58 +0100;
  • 6992ce4 Merge branch 'master' into devel by Laurent Gatto <l.gatto@dnavision.be> 2017-04-11 15:08:32 +0000;
  • 9dc2144 fix news version by Laurent <lg390@cam.ac.uk> 2017-04-11 16:08:16 +0100;
  • 9664b6e Merge branch 'master' into devel by Laurent Gatto <l.gatto@dnavision.be> 2017-04-11 15:07:16 +0000;
  • d8e263b only news md by Laurent <lg390@cam.ac.uk> 2017-04-11 16:06:55 +0100;
  • ef1676c Merge branch 'master' into devel by Laurent Gatto <l.gatto@dnavision.be> 2017-04-11 15:06:19 +0000;
  • a402deb update news by Laurent <lg390@cam.ac.uk> 2017-04-11 16:05:46 +0100;
  • 5fec3b6 Merge branch 'master' into devel by Laurent Gatto <l.gatto@dnavision.be> 2017-04-07 07:03:17 +0000;
  • 5bc07ea add files to inst/doc to fix vignette build by Laurent <lg390@cam.ac.uk> 2017-04-07 08:02:27 +0100;
  • 0f724e6 Merge branch 'master' into devel by Laurent Gatto <l.gatto@dnavision.be> 2017-04-06 15:54:09 +0000;
  • 9444fa7 add/update links to github page by Laurent <lg390@cam.ac.uk> 2017-04-06 16:52:39 +0100;
  • d213334 remove superflous performance2 method by Laurent Gatto <l.gatto@dnavision.be> 2017-04-05 17:51:14 +0000;
  • acbc726 fix conflict by Laurent Gatto <l.gatto@dnavision.be> 2017-04-05 17:51:00 +0000;
  • 9cf05d7 add unit test for .cumsumIntensities by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 13:10:23 +0200;
  • 4bca1eb add unit test for filterEmptyFragments by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 13:03:56 +0200;
  • 177ae8b add unit tests for .getSpectrum and .sumAllPeakCounts by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 12:52:34 +0200;
  • 5812a78 add @noRd to avoid warning about invalid documentation path by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 12:07:58 +0200;
  • b08e483 add docs/ directory; closes <a href="#132">#132</a> by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 12:03:32 +0200;
  • 95451aa add branch-specific gitignores as described at https://lgatto.github.io/branch-specific-gitignore/ by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 11:49:32 +0200;
  • 9eb9d03 remove biocView GUI by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 11:13:55 +0200;
  • eca5744 avoid NOTE: \examples lines wider than 100 characters by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-05 10:57:01 +0200;
  • 608ba0e remove results="asis" by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-04 12:36:35 +0200;
  • 6a960aa use synobj2RData() to access synobj2 by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-04 11:36:44 +0200;
  • 05bd448 Revert "replace synobj2 by synobj3" by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-04 11:32:19 +0200;
  • f73e92a Merge branch '2.0' of github.com:lgatto/synapter into 2.0 by Laurent <lg390@cam.ac.uk> 2017-04-04 10:34:00 +0200;
  • 8c33fe2 suggest synapterdata 1.13.2 by Laurent <lg390@cam.ac.uk> 2017-04-04 10:32:12 +0200;
  • aa512d0 Merge branch '2.0' of github.com:lgatto/synapter into 2.0 by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-04 00:54:45 +0200;
  • b6bd69c limit output to the first 13 lines by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-04 00:54:37 +0200;
  • 7771324 adapt mergeMaster unit test to new span.rt/span.int arguments by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-04 00:13:01 +0200;
  • 7e7d81e fix class version assignment by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-04 00:03:09 +0200;
  • 91f6a71 replace synobj2 by synobj3 by Sebastian Gibb <mail@sebastiangibb.de> 2017-04-03 23:58:31 +0200;
  • da20825 depend on synapterdata 1.13.1 for synobj3 by Laurent <lg390@cam.ac.uk> 2017-04-03 16:05:30 +0200;
  • ccbd841 replace (m)apply by for loops by Sebastian Gibb <mail@sebastiangibb.de> 2017-03-24 14:00:51 +0100;
  • 5cf9a32 fix calculateGridPerformance for categories with 0 occurence; fix <a href="#134">#134</a> by Sebastian Gibb <mail@sebastiangibb.de> 2017-03-24 13:27:27 +0100;
  • b6088c5 set missedCleavages=2 as default for synergise2 by Sebastian Gibb <mail@sebastiangibb.de> 2017-03-12 17:51:57 +0100;
  • 42a0851 rerun roxygen by Sebastian Gibb <mail@sebastiangibb.de> 2017-03-04 22:40:18 +0100;
  • b51c9a3 add span.rt and span.int to makeMaster by Sebastian Gibb <mail@sebastiangibb.de> 2017-03-04 22:40:04 +0100;
  • f915466 define constant for classVersion to avoid regression in .isCurrent by Sebastian Gibb <mail@sebastiangibb.de> 2017-02-08 01:16:39 +0000;
  • e0cbdf7 extend performance report [ci skip] by Sebastian Gibb <mail@sebastiangibb.de> 2017-01-25 14:05:50 +0100;