Browse code

fixed warning

PGangras authored on 08/12/2022 18:16:07
Showing 3 changed files

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@@ -2,7 +2,7 @@ Package: surfaltr
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 Type: Package
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 Title: Rapid Comparison of Surface Protein Isoform Membrane Topologies
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         Through surfaltr
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-Version: 1.5.0
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+Version: 1.5.1
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 Authors@R: 
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       c(person(given = "Pooja",
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            family = "Gangras",
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@@ -20,3 +20,5 @@
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 # Changes in version 1.2.0 (2021-02-05)
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 * Clarified vignette text and added troubleshooting tips
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+# Changes in version 1.5.1 (2022-08-12)
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+* Fixed warning
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@@ -17,10 +17,10 @@
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 #' @importFrom testthat expect_equal
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 #' @importFrom stringr str_remove
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-tmhmm_fix_path <- function(fasta_filename, tmhmm_folder_name) {
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-    bin_path <- normalizePath(file.path(tmhmm_folder_name, "bin", "decodeanhmm.linux"))
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-    options_path <- file.path(tmhmm_folder_name, "lib","TMHMM2.0.options")
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-    model_path <- file.path(tmhmm_folder_name, "lib","TMHMM2.0.model")
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+tmhmm_fix_path <- function(fasta_filename, folder_name) {
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+    bin_path <- normalizePath(file.path(folder_name, "bin", "decodeanhmm.linux"))
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+    options_path <- file.path(folder_name, "lib","TMHMM2.0.options")
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+    model_path <- file.path(folder_name, "lib","TMHMM2.0.model")
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     cmds <- c("-f", options_path, "-modelfile", model_path)
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     text <- NA
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     suppressWarnings(text <- system2(