# Generated by roxygen2: do not edit by hand

S3method(get_phobius,character)
S3method(get_phobius,data.frame)
S3method(get_phobius,default)
S3method(get_phobius,list)
export(align_org_prts)
export(align_prts)
export(check_tmhmm_install)
export(get_pairs)
export(get_tmhmm)
export(graph_from_aas)
export(graph_from_ids)
export(plot_isoforms)
export(run_phobius)
import(ggplot2)
import(httr)
import(msa)
import(seqinr)
import(stringr)
import(utils)
import(xml2)
importFrom(Biostrings,readAAStringSet)
importFrom(biomaRt,getBM)
importFrom(biomaRt,useEnsembl)
importFrom(dplyr,"%>%")
importFrom(dplyr,all_equal)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,rename)
importFrom(httr,config)
importFrom(httr,set_config)
importFrom(methods,is)
importFrom(protr,getUniProt)
importFrom(readr,parse_number)
importFrom(seqinr,write.fasta)
importFrom(stringr,str_remove)
importFrom(stringr,str_split)
importFrom(testthat,expect_equal)
importFrom(utils,"write.csv")
importFrom(utils,assignInNamespace)
importFrom(utils,read.csv)
importFrom(utils,write.csv)