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  • 6ddadbf (HEAD -> devel, origin/master, origin/devel, origin/HEAD) version bump by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-05-10 18:52:33 +1000;
  • cdc0256 fix a bug in plotting pca by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-05-10 16:28:53 +1000;
  • 8faadab version bump by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-05-01 21:56:12 +1000;
  • 431b149 version correct by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-05-01 22:00:57 +1000;
  • f2faff2 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2023-05-01 20:34:22 +1000;
  • 4b00ea9 fix a bug of preparedecon by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-05-01 15:09:38 +1000;
  • ad8da7c Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2023-04-28 16:36:17 +1000;
  • 90dc5d5 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2023-04-28 15:50:46 +1000;
  • 83b92f8 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2023-04-28 15:49:01 +1000;
  • 9beabae Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2023-04-28 14:00:34 +1000;
  • 5454645 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2023-04-28 12:32:09 +1000;
  • 2a83dba Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2023-04-28 11:35:21 +1000;
  • 5cd6850 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:37:16 -0400;
  • c749cd1 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:37:16 -0400;
  • 41e0095 version bump by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-04-19 09:48:31 +1000;
  • f0fcb01 Fix a bug when scater is not available to compute pca by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-04-18 14:27:14 +1000;
  • 33cd399 version bump by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-30 13:09:34 +1100;
  • 8236f99 multiple negprobes by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-30 11:51:02 +1100;
  • 354ab8e update by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-30 11:12:39 +1100;
  • b0d9150 bug fix by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-30 10:48:36 +1100;
  • c3ac6d0 add test by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-29 16:59:45 +1100;
  • 4252235 update vignette by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-29 16:25:10 +1100;
  • f3dcf3b update vignette by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-29 16:10:51 +1100;
  • a789583 add function to talk to spatialdecon by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-29 15:58:41 +1100;
  • e8de59d version bump by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-20 14:34:31 +1100;
  • 16db994 fix test bug with plotrle by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-20 14:09:24 +1100;
  • b91bfb3 version bump by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-20 13:46:48 +1100;
  • ece79dd fix empty ordannts bug by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-20 13:46:17 +1100;
  • 4370525 version bump by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-20 13:33:35 +1100;
  • 9c35558 fix bug of ordersample by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-03-20 13:31:24 +1100;
  • b9c3e0f bump version, new vignette by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-23 16:51:20 +1100;
  • a0c1165 new vignettes by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-23 16:00:36 +1100;
  • a258614 bug fix for spe2dge by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-23 15:39:59 +1100;
  • c12c0d1 update spe2dge function by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-23 15:15:42 +1100;
  • f3d48bb Update DESCRIPTION by Ning Liu <liu.n@wehi.edu.au> 2023-02-08 11:09:33 +1100;
  • 960e4fc Merge pull request <a href="#10">#10</a> from DavisLaboratory/RELEASE_3_16 by Ning Liu <liu.n@wehi.edu.au> 2023-02-08 10:42:21 +1100;
  • 90adf62 (origin/RELEASE_3_16, RELEASE_3_16) version bump for RELEASE_3_16 by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-07 11:56:21 +1100;
  • 64dbd27 Update DESCRIPTION by Ning Liu <liu.n@wehi.edu.au> 2023-02-07 11:34:33 +1100;
  • 646939c version bump in devel by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-07 11:22:49 +1100;
  • 8d80329 bug fix by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-07 11:17:58 +1100;
  • 96e27df bug fix, add new RUV4 by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-01-31 13:20:53 +1100;
  • 1468a19 update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-11-23 15:38:28 +1100;
  • d1d2207 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-10 11:01:20 +1100;
  • e060ceb Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 17:02:59 +1100;
  • 3019070 update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-11-23 15:24:34 +1100;
  • 1e89b50 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-10 11:01:20 +1100;
  • 752a29a Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 17:02:59 +1100;
  • d088695 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 16:58:01 +1100;
  • c8c1b2d Bug fix by Roy Lardenoije <39619971+lardenoije@users.noreply.github.com> 2022-11-08 10:42:42 +0100;
  • 2ab5b93 bump version in RELEASE_3_16 by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-07 11:51:40 +1100;
  • 8ee3c50 version bump in release by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-07 11:43:00 +1100;
  • 2b57fbd Update DESCRIPTION by Ning Liu <liu.n@wehi.edu.au> 2023-02-07 11:34:33 +1100;
  • 59b979d Merge pull request <a href="#9">#9</a> from DavisLaboratory/master by Ning Liu <liu.n@wehi.edu.au> 2023-02-07 11:31:34 +1100;
  • b7b56d8 version bump in devel by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-07 11:22:49 +1100;
  • c3b839f bug fix by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-02-07 11:17:58 +1100;
  • d2eb69f Merge remote-tracking branch 'upstream/master' by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-01-31 13:44:20 +1100;
  • 88dc972 bug fix, add new RUV4 by ningbioinfostruggling <liu.n@wehi.edu.au> 2023-01-31 13:20:53 +1100;
  • 29e7eb8 update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-11-23 16:05:27 +1100;
  • 1a27820 update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-11-23 15:38:28 +1100;
  • 17e9103 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-10 11:01:20 +1100;
  • e9e4c48 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 17:02:59 +1100;
  • 47dfb9d Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 16:58:01 +1100;
  • 06d31bc Bug fix by Roy Lardenoije <39619971+lardenoije@users.noreply.github.com> 2022-11-08 10:42:42 +0100;
  • ae7f24a update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-11-23 15:24:34 +1100;
  • 8b3878a Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-10 11:01:20 +1100;
  • 62defe1 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 17:02:59 +1100;
  • 36131ec Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 16:58:01 +1100;
  • cdbb8ff Merge pull request <a href="#5">#5</a> from lardenoije/patch-1 by Ning Liu <liu.n@wehi.edu.au> 2022-11-09 16:09:45 +1100;
  • 779f98a Bug fix by Roy Lardenoije <39619971+lardenoije@users.noreply.github.com> 2022-11-08 10:42:42 +0100;
  • 81bcae9 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:26:48 -0400;
  • fd4f796 bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:26:48 -0400;
  • ca8fb3c fix bug when only one ROI in a slide by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-10-04 20:17:13 +1100;
  • 0168cb8 fix bug in addQC when there is only one gene to remove by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-09-06 11:08:02 +1000;
  • 9f3d3d5 update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-08-16 15:08:18 +1000;
  • 64478a6 fix bug in readGeoMx by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-08-08 16:33:33 +1000;
  • 7f0d981 merge PR by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-08-03 16:04:25 +1000;
  • 0b68dfd Merge pull request <a href="#2">#2</a> from kieranrcampbell/master by Ning Liu <liu.n@wehi.edu.au> 2022-08-03 16:02:16 +1000;
  • 4e8e1f8 Merge branch 'master' into master by Ning Liu <liu.n@wehi.edu.au> 2022-08-03 15:40:51 +1000;
  • 191e156 bump version by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-08-03 15:18:29 +1000;
  • 21c2275 Fixed conflicts in version change by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-08-03 15:10:37 +1000;
  • 78a22fc fix bug when reading df for feature anno by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-08-03 14:50:41 +1000;
  • 26f7cca name typo by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-07-06 15:12:35 +1000;
  • 7aa15a4 new flowchart by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-07-06 15:09:58 +1000;
  • 94f2a7f not plot removed genes when there is none by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-07-04 16:29:29 +1000;
  • bf5b0c4 fix a bug when there are multiple negprobes with the same name. by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-07-04 15:26:10 +1000;
  • 5acb0bb fix a bug when reading in files. by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-07-04 15:13:56 +1000;
  • 3aa7e8f fix a bug when reading files by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-07-04 15:05:41 +1000;
  • 8c276b6 fix bug of seeding in plotparipca by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-06-06 12:39:59 +1000;
  • b3ec4c8 update flipcoord by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-06-06 12:15:30 +1000;
  • 25f0e64 add flipcoord option by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-06-06 11:53:28 +1000;
  • 61b5468 update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-06-06 11:24:47 +1000;
  • de44210 Update pcaOtherPlotting.R by Ning Liu <liu.n@wehi.edu.au> 2022-06-06 10:52:39 +1000;
  • 6550dad add RUVg by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-05-30 14:52:52 +1000;
  • 82d9ad5 add RUVg by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-05-30 14:33:14 +1000;
  • ff1ed6b update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-05-16 14:28:57 +1000;
  • 381b917 update by ningbioinfostruggling <liu.n@wehi.edu.au> 2022-05-16 13:04:24 +1000;
  • 1cb7734 Update pcaOtherPlotting.R by Ning Liu <liu.n@wehi.edu.au> 2022-05-16 12:35:49 +1000;
  • ceee7e7 Update pcaOtherPlotting.R by Ning Liu <liu.n@wehi.edu.au> 2022-05-16 12:28:00 +1000;
  • 5dff58a Add StatStratum import from ggalluvial and move ggalluvial to imports by kieranrcampbell <kieranrcampbell@gmail.com> 2022-05-05 12:41:00 -0400;
  • 7527646 Update R-CMD-check.yaml by Ning Liu <liu.n@wehi.edu.au> 2022-04-28 15:02:41 +1000;