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README.md
# slalom [![Build Status](https://travis-ci.com/PMBio/slalom.svg?token=TPVSwxxeSiwiqCz5NGEr&branch=master)](https://travis-ci.com/PMBio/slalom) This package is an R/C++ implementation of the factorial single-cell latent variable model developed by Buettner et al (Genome Biology, 2017). The `slalom` package is available Bioconductor, so the most reliable way to install the package is to use the usual Bioconductor method: ```{R} ## try http:// if https:// URLs are not supported if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("slalom") ``` For details of how to use `slalom`, please consult the **vignette** and **package documentation**. Davis McCarthy and Florian Buettner, October 2017 (on behalf of `slalom` and f-scLVM authors and contributors)