## .travis.yml file for use with metacran/r-builder ## See https://github.com/metacran/r-builder for details. language: c sudo: required before_install: - sudo add-apt-repository ppa:ubuntu-toolchain-r/test -y - sudo apt-get update -qq - sudo apt-get install -qq libyajl-dev libxml2-dev libxqilla-dev libstdc++-4.8-dev - sudo apt-get install -qq g++-4.8 - export CXX="g++-4.8" - export CC="gcc-4.8" - curl -OL https://raw.githubusercontent.com/metacran/r-builder/master/pkg-build.sh - chmod 755 pkg-build.sh - ./pkg-build.sh bootstrap install: - ./pkg-build.sh install_bioc_deps - ./pkg-build.sh install_github jimhester/covr script: - ./pkg-build.sh run_tests after_success: - ./pkg-build.sh run_script -e 'covr::codecov()' after_failure: - ./pkg-build.sh dump_logs notifications: email: on_success: change on_failure: change env: global: - BOOTSTRAP_LATEX=true # Required to build pdf vignettes (+ manual); slower - R_CHECK_ARGS="--no-vignettes --timings" # Mimic BioC build machines matrix: - RVERSION=devel # BioC 3.3 uses R 3.3.x (R-devel at the time of writing). # This needs to be manually updated upon new BioC version.