Bioconductor Code: Browse

September 28, 2022

	View27e3c620f Deprecate `getTSNE`, add `runTSNE` and `runQuickTSNE` Yichen Wang authored on 28/09/2022 06:39:03
	Viewc35af4eb2 Deprecate "getUMAP", add "runUMAP" and "runQuickUMAP" Yichen Wang authored on 28/09/2022 03:49:28

June 28, 2022

	Viewf0b0d74b6 Fix check errors Yichen Wang authored on 28/06/2022 22:07:14
	View976db8699 Added more unit tests Yichen Wang authored on 28/06/2022 20:51:30

October 15, 2020

	Viewc06bc73b7 Use subsetSCECols to subset data in example Yusuke Koga authored on 15/10/2020 17:11:54

July 2, 2020

	View3fcae1c4c Removed SCtkExperiment class and methods. Removed all references in the documentation Joshua D. Campbell authored on 02/07/2020 04:10:40

June 17, 2020

	Viewbc6984eab Incorporate new per-QC plotting fxn Yusuke Koga authored on 17/06/2020 13:39:12

September 25, 2019

	Viewc07f40fe2 Remove deprecated is.null call to reduceDim David Jenkins authored on 25/09/2019 03:20:24

May 23, 2019

	Viewc35831783 added axis names for tSNE and UMAP, fixed the issue for gene expression plot with null and not-null axis labels Mohammed Muzamil Khan authored on 23/05/2019 20:29:47

January 30, 2019

	View9efd0344c Added new functionality called UMAP with separate files for getUMAP and plotUMAP, Rshiny part for UMAP similar to tSNE with updates in getClusterinputData and related files Mohammed Muzamil Khan authored on 30/01/2019 18:16:48