Bioconductor Code: Browse

June 28, 2022

	Viewf0b0d74b6 Fix check errors Yichen Wang authored on 28/06/2022 22:07:14
	View976db8699 Added more unit tests Yichen Wang authored on 28/06/2022 20:51:30

April 30, 2021

	Viewe41fdba4f Added 'runDimensionalityReduction' wrapper function and changed name of getPCA() function to scaterPCA to conform the currently used naming convention. Irzam Sarfraz authored on 30/04/2021 13:30:37

July 2, 2020

	View3fcae1c4c Removed SCtkExperiment class and methods. Removed all references in the documentation Joshua D. Campbell authored on 02/07/2020 04:10:40

September 25, 2019

	Viewc07f40fe2 Remove deprecated is.null call to reduceDim David Jenkins authored on 25/09/2019 03:20:24

March 29, 2019

	Viewa7648e0a4 removed duplicates which came up due to @describeIn section from dependent PCA, tSNE methods Mohammed Muzamil Khan authored on 29/03/2019 19:11:25

April 12, 2018

	View0be6f6504 Consistent use of inSCE to refer to the input SCtkExperiment object. Combined documentation for functions with similar functionality. Version bump David Jenkins authored on 12/04/2018 22:21:24

April 6, 2018

	Viewc32ed94f2 Consistent use of camel case throughout the app David Jenkins authored on 06/04/2018 20:11:01

March 29, 2018

	View8d00ddcda bugfix to support numeric conditions. package linted. Clarification about what kind of data to use for each algorithm David Jenkins authored on 29/03/2018 03:48:01

March 20, 2018

	View50eb69083 Removed examples that weren't being used. Updated requirement to 3.5 for bioconductor release, changednged the name of the GSE60361 dataset to be more descriptive. Added a link to the data source. Fixed DESeq2 bug. Version bump David Jenkins authored on 20/03/2018 23:51:57

February 22, 2018

	View1db9e48a5 Updates to pass BiocCheck David Jenkins authored on 22/02/2018 23:37:15

February 20, 2018

	View443bc2c7a Added runnable examples to more functions David Jenkins authored on 20/02/2018 02:44:56

February 16, 2018

	View40c2c3134 Documentation updates to add examples and fix indentation David Jenkins authored on 16/02/2018 22:45:56

February 14, 2018

	View1a986a771 Support for loading in SingleCellExperiment objects that don't contain a matrix called counts David Jenkins authored on 14/02/2018 23:09:32

February 13, 2018

	Viewac2ad89f8 Fix for slow loading gene names in pcaplot. PCA dimensions are now read from the selected reducedDim matrix David Jenkins authored on 13/02/2018 23:18:45