February 17, 2022
View305bb6295

Update SoupX into runCellQC function. Edit runDecontX metadata structure as metadata(sce)$sctk$runDecontX$sample. Also updated CellQC report to accommodate the changes in metadata

rz2333 authored on 17/02/2022 13:57:52
November 23, 2021
View558e269c9

Add new feature: DEG volcano plot; optimized some other manual text

Yichen Wang authored on 23/11/2021 03:25:28
November 22, 2021
Viewdfe50c33f

Update dedup functionality for import data functions & update tutorial with VAM

Yichen Wang authored on 22/11/2021 17:57:17
September 2, 2021
Viewd32b31c82

Fix dgTMatrix bugs in import functions.Change output name of row/colData in exportSCEToFlat function

rz2333 authored on 02/09/2021 17:03:47
December 30, 2020
View969718f95

Update importMitoGeneSet function. Change delayedArray=False for all import function. Minor fixs in QC HTML report

rz2333 authored on 30/12/2020 17:40:20
October 22, 2020
View6fe21ae1e

Edit links to documentation

unknown authored on 22/10/2020 03:39:09
October 16, 2020
View4f733353f

Merge from upstream

rz2333 authored on 16/10/2020 03:10:12
October 15, 2020
View0ccddee17

Add Runnable functions

Yusuke Koga authored on 15/10/2020 16:44:51
Viewac1737659

Update SCTK_QC, importAnnData and sce2adata.R

rz2333 authored on 15/10/2020 16:02:58
October 12, 2020
View31390a703

Updated description in DESCRIPTION. Moved importMultipleSources to its own file and removed some shiny code. Updated docs.

Joshua D. Campbell authored on 12/10/2020 18:25:27
July 8, 2020
Viewd9e97f779

fixing anndata metadata slot

Shruthi Bandyadka authored on 08/07/2020 16:47:33
View974cffb0a

fixing metadata slot for anndata import

Shruthi Bandyadka authored on 08/07/2020 16:46:54
June 17, 2020
View32c98dffa

changing subsetted anndata filename

Shruthi Bandyadka authored on 17/06/2020 15:55:10
June 12, 2020
View862935c93

import anndata as SCE. updating reticulate dependency for py_to_r()

Shruthi Bandyadka authored on 12/06/2020 20:35:33
View47ee3249e

import anndata as SCE.

Shruthi Bandyadka authored on 12/06/2020 20:12:54