Name Mode Size
R 040000
inst 040000
man 040000
tests 040000
vignettes 040000
.Rbuildignore 100644 0 kb
.gitignore 100644 0 kb
DESCRIPTION 100644 1 kb
NAMESPACE 100644 2 kb
NEWS.md 100644 1 kb
README.md 100644 1 kb
README.md
# simPIC | | | | -------------- | ------------- | | Project Status | [![Project Status.](http://www.repostatus.org/badges/latest/wip.svg)](http://www.repostatus.org/#wip) | ## Overview simPIC is an R package for simple simulation of single-cell Assay for Transposase Accessible Chromatin sequencing (scATAC-seq) data. simPIC provides a an easy to use interface for: * estimating simulation parameters * Objects for storing those parameters * simulating counts using those parameters ## Installation The package can be installed from Bioconductor using the following code ```r if(!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("simPIC") ``` ## Getting started To get started, check out the vignette for a quick start and detailed look into simPIC. If you prefer, you can also build the vignette yourself by loading simpIC and exploring the available options. ```r library(simPIC) browseVignettes("simPIC") ```