1. shinyepico
  2. Graph
Graph of shinyepico
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  • e11b8e3 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:28:08 -0400;
  • 1ddbe37 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:28:08 -0400;
  • cadb9ab bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:25:05 -0400;
  • 51a902c (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:25:05 -0400;
  • 2ea0eb3 added biocstyle by Octavio Morante-Palacios <octaviompa@gmail.com> 2023-04-16 18:09:15 +0200;
  • 8bffea8 version bump by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-12-06 21:06:04 +0100;
  • 06a345a remove specific check for mCSEA results due to test error by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-12-06 21:04:26 +0100;
  • 142808b bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:23:28 -0400;
  • 628f63d (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:23:28 -0400;
  • 658efc6 Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-31 16:15:04 +0200;
  • 4f8b71c version bumped 1.5.2 by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-20 10:09:20 +0200;
  • 731c058 (origin/RELEASE_3_15, RELEASE_3_15) version bumped by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-18 20:37:19 +0200;
  • b2826d5 fixed problem with R 4.2 by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-18 20:35:23 +0200;
  • a70e7f9 fixed problem with R 4.2 by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-18 20:35:23 +0200;
  • c3baa4a bumped version for the new bioC devel by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-10 10:48:22 +0200;
  • daf227b Merge branch 'master' into RELEASE_3_15 by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-10 10:29:55 +0200;
  • 8a20e4f Merge remote-tracking branch 'origin/RELEASE_3_15' by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-10 10:28:15 +0200;
  • a710451 Merge remote-tracking branch 'origin' into RELEASE_3_15 by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-10 10:26:48 +0200;
  • e450246 DESCRIPTION file tidyr dplyr and rlang requirements changed by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-10 10:24:15 +0200;
  • 8ae3061 corrected description file for version 3_15 bioconductor by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-10 00:00:41 +0200;
  • a87a417 version change by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-09 23:52:43 +0200;
  • 14c1b07 fixed package version by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-09 22:01:31 +0200;
  • e942bc6 Fixed problems with dplyr 1.0 bisulfite plot and contrasts table by Octavio Morante-Palacios <octaviompa@gmail.com> 2022-05-09 21:46:29 +0200;
  • b5e9987 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:11:05 +0000;
  • 176240d bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:11:05 +0000;
  • 9dc27eb Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2021-11-02 15:59:35 +0100;
  • 5f70e66 Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2021-11-02 15:57:47 +0100;
  • 9a88f13 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:05:11 +0000;
  • 513ba64 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:05:11 +0000;
  • 1df6ad7 Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2021-07-28 14:02:51 +0200;
  • 8c80fab Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2021-05-26 09:07:43 +0200;
  • cc0cb92 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:58:03 +0000;
  • 42ea0c9 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:58:03 +0000;
  • 804dca1 Merge branch 'master' of https://github.com/omorante/shinyepico by Octavio Morante Palacios <octaviompa@gmail.com> 2021-04-27 16:40:48 +0200;
  • bae529f Bug Fixed: densityplot and boxplots CpG subsampling when n < nrow(bvalues) by Octavio Morante Palacios <octaviompa@gmail.com> 2021-04-27 16:13:50 +0200;
  • 6638084 Bug Fixed: densityplot and boxplots CpG subsampling when n < nrow(bvalues) by Octavio Morante Palacios <octaviompa@gmail.com> 2021-04-27 16:13:50 +0200;
  • caf47f9 Merge branch 'master' of https://github.com/omorante/shinyepico by Octavio Morante Palacios <octaviompa@gmail.com> 2021-01-08 17:28:00 +0100;
  • 0ca1430 Added citation info by Octavio Morante Palacios <octaviompa@gmail.com> 2021-01-08 17:27:43 +0100;
  • 4b53dde Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2021-01-07 17:32:28 +0100;
  • afc89ad Bug fixed: DMR plot group colors by Octavio Morante Palacios <octaviompa@gmail.com> 2021-01-07 15:24:24 +0100;
  • f5d4e2d added norm_options to script download by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-30 12:51:38 +0100;
  • 68da68c fixed sample names by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-30 10:57:47 +0100;
  • a13382e Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-30 10:16:50 +0100;
  • 055d57b Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-25 11:50:52 +0100;
  • d14943c Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-23 10:24:57 +0100;
  • fc912ad Added unit tests by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-20 17:26:24 +0100;
  • 8fa9655 Merge branch 'master' of https://github.com/omorante/shinyepico l by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-20 15:07:00 +0100;
  • 5efa7a4 Changes in vignette. Fixed message+paste use by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-20 15:06:35 +0100;
  • 23c21be Update r.yml by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-17 18:35:32 +0100;
  • 27a2de3 Corrected vignette errors by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-17 18:23:03 +0100;
  • 2407976 Added manual pdf in help section by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-16 17:04:58 +0100;
  • 9eb4729 Version bump by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-15 18:44:43 +0100;
  • 5728124 Change in vignette, removed seed from documentation by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-15 18:42:48 +0100;
  • ec5de02 Added check installed annotations. Change in DESCRIPTION. Removed set.seed by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-15 18:11:36 +0100;
  • 82ee15b vignette modified by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-14 00:43:00 +0100;
  • c8b361d Added link to manual in about tab by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-13 14:15:26 +0100;
  • aa29da3 Added link to manual in about tab by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-13 14:14:12 +0100;
  • 90ab74b Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-13 12:53:10 +0100;
  • 0fed407 Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-13 12:49:30 +0100;
  • 171fc2c Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-13 11:12:55 +0100;
  • fea5fea Change in detectP filtering by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-13 10:05:45 +0100;
  • fd30980 Merge branch 'master' of https://github.com/omorante/shinyepico by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 17:43:23 +0100;
  • 3f03afa minor fix by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 17:42:14 +0100;
  • 71023f4 Update README.md by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-11 17:05:12 +0100;
  • 67c0197 removed example data from master branch by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 16:59:00 +0100;
  • 832fb39 Merge pull request <a href="#11">#11</a> from omorante/dev by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-11 16:53:59 +0100;
  • 86e2fdd Added doc folder by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 16:52:23 +0100;
  • 2f065c6 Merge pull request <a href="#10">#10</a> from omorante/dev by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-11 16:50:55 +0100;
  • 1688098 Change in manual by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 16:50:12 +0100;
  • 7ee353d Merge pull request <a href="#9">#9</a> from omorante/dev by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-11 16:46:10 +0100;
  • 8838d34 Update r.yml by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-11 16:43:12 +0100;
  • 78dcf0a Added doc folder by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 16:29:19 +0100;
  • b315013 Minor fix by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 16:15:56 +0100;
  • 36a9dbf Minor fix by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 16:14:26 +0100;
  • e3621de Minor fix by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 16:13:57 +0100;
  • 3944616 Untrack files in .gitignore by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 14:05:26 +0100;
  • b3e78db removed system file by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 13:40:52 +0100;
  • dcb2038 code styling by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 13:35:24 +0100;
  • 154b89e Added new function generate_clean_sampletarget by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-11 13:03:00 +0100;
  • 701a5fc Added type=Illumina by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-10 18:48:56 +0100;
  • dfc6bf3 Fixed bug with DMRs heatmap contrast selection by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-09 00:37:00 +0100;
  • d398e79 minor fix· by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-09 00:19:15 +0100;
  • 326e12f Code restyled with rstyler, add_dmrs_globaldifs reworked, fixed DMRs heatdata function by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-09 00:13:40 +0100;
  • a9f4657 added initial vignette by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-07 17:02:18 +0100;
  • 1ee07ef Improved downloaded script, now with heatmap info by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-07 15:30:32 +0100;
  • f197b78 removed setDT and changed with as.data.table by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-07 00:42:13 +0100;
  • e3cfc39 filteredmcsea2heatmap and filteredlist2heatmap separated functions by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-06 17:08:07 +0100;
  • 6d99eb7 Corrected DMRs bug: heatmap with duplicated values by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-05 16:49:26 +0100;
  • 861bb4c Minor fixes by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-05 14:00:14 +0100;
  • 039069f Added support for heatmaply in DMR heatmap by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-05 00:10:04 +0100;
  • 5bde6ac Improved script export. Added individual DMP graph by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-04 22:55:15 +0100;
  • ba32b77 removed unnecessary file by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-04 19:38:25 +0100;
  • e89ac82 modified rval_annotation. Added initial support to script downloading by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-04 19:36:31 +0100;
  • 6b0e7b3 Added download of heatmap DMR by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-03 18:14:33 +0100;
  • 8500bbd Added messages when data has not been uploaded by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-02 18:47:28 +0100;
  • bb9d481 Added markdown support to DMRs. Subsetting in R objects downloading and restructure function files by Octavio Morante Palacios <octaviompa@gmail.com> 2020-11-02 17:51:56 +0100;
  • 1db940a Preliminary implementation of p.values in correlation plot by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-01 23:44:02 +0100;
  • b2a7296 Added liftover support by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-11-01 22:58:49 +0100;
  • 736b155 Added support for DMRs bed download. Added auto enabling/disabling download bed button by Octavio Morante-Palacios <octaviompa@gmail.com> 2020-10-31 20:54:16 +0100;
  • 950d87f Implemented DMRs downloading by contrast by Octavio Morante Palacios <octaviompa@gmail.com> 2020-10-30 17:40:24 +0100;