# Generated by roxygen2: do not edit by hand export("%>>%") export("response<-") export(AWSInstanceTypeRequirement) export(AnyRequirement) export(App) export(Auth) export(Binding) export(CCBList) export(CLB) export(COB) export(CPURequirement) export(CWL) export(CommandInputParameter) export(CommandInputSchema) export(CommandLineBinding) export(CommandLineTool) export(CommandOutputBinding) export(CommandOutputParameter) export(CommandOutputSchema) export(ComplexEnum) export(CreateFileRequirement) export(DSCList) export(DatatypeEnum) export(DockerRequirement) export(EnvVarRequirement) export(EnvironmentDef) export(EnvironmentDefList) export(Expression) export(ExpressionEngineRequirement) export(ExpressionTool) export(FS) export(File) export(FileDef) export(FileDefList) export(FileList) export(Files) export(FilesList) export(Flow) export(IPList) export(InPar) export(InputParameter) export(InputParameterList) export(InputSchema) export(ItemArray) export(MemRequirement) export(Metadata) export(OPList) export(OutPar) export(OutputParameter) export(OutputParameterList) export(OutputSchema) export(Parameter) export(PrimitiveEnum) export(Process) export(ProcessRequirement) export(ProcessRequirementList) export(SBGWorkflow) export(ScatterFeatureRequirement) export(Schema) export(SchemaDef) export(SchemaDefList) export(SchemaList) export(SubworkflowFeatureRequirement) export(Tool) export(Workflow) export(WorkflowOutputParameter) export(WorkflowOutputParameterList) export(WorkflowStep) export(WorkflowStepInput) export(WorkflowStepInputList) export(WorkflowStepList) export(WorkflowStepOutput) export(WorkflowStepOutputList) export(access_level) export(addIdNum) export(add_tag) export(age_at_diagnosis) export(aliquot_id) export(aliquot_uuid) export(analysis_uuid) export(anyReq) export(api) export(appType) export(argslist) export(asList) export(aws) export(batch) export(case_id) export(case_uuid) export(cli_list_projects) export(cli_list_tags) export(cli_upload) export(convert_app) export(cpu) export(data_format) export(data_subtype) export(data_type) export(days_to_death) export(delete) export(disease_type) export(docker) export(download) export(enum) export(ethnicity) export(experimental_strategy) export(fileDef) export(file_extension) export(file_segment_number) export(gdc_file_uuid) export(gender) export(getTaskHook) export(get_cwl_class) export(get_token) export(get_uploader) export(input) export(input_matrix) export(investigation) export(is_commandlinetool) export(is_workflow) export(library_id) export(link) export(link_what) export(mem) export(misc_get_token) export(misc_get_uploader) export(misc_make_metadata) export(misc_upload_cli) export(output) export(output_matrix) export(paired_end) export(platform) export(platform_unit_id) export(primary_site) export(project_details) export(project_members) export(quality_scale) export(race) export(reference_genome) export(requirements) export(response) export(sample_id) export(sample_type) export(sample_uuid) export(sbg_get_env) export(sbg_set_env) export(setTaskHook) export(set_tag) export(set_test_env) export(test_tool_bunny) export(test_tool_cwlrun) export(test_tool_rabix) export(upload_complete_all) export(upload_complete_part) export(upload_delete) export(upload_info) export(upload_info_part) export(upload_init) export(vital_status) exportClasses(AWSInstanceTypeRequirement) exportClasses(AnyRequirement) exportClasses(Auth) exportClasses(Binding) exportClasses(CPURequirement) exportClasses(CWL) exportClasses(CommandInputParameter) exportClasses(CommandInputSchema) exportClasses(CommandLineBinding) exportClasses(CommandLineTool) exportClasses(CommandOutputBinding) exportClasses(CommandOutputParameter) exportClasses(CommandOutputSchema) exportClasses(ComplexSingleEnum) exportClasses(CreateFileRequirement) exportClasses(DSCList) exportClasses(DatatypeSingleEnum) exportClasses(DockerRequirement) exportClasses(EnvVarRequirement) exportClasses(EnvironmentDef) exportClasses(EnvironmentDefList) exportClasses(Expression) exportClasses(ExpressionEngineRequirement) exportClasses(ExpressionTool) exportClasses(File) exportClasses(FileDef) exportClasses(FileDefList) exportClasses(FileList) exportClasses(Files) exportClasses(FilesList) exportClasses(InputParameter) exportClasses(InputParameterList) exportClasses(InputSchema) exportClasses(ItemArray) exportClasses(MemRequirement) exportClasses(Metadata) exportClasses(OutputParameter) exportClasses(OutputParameterList) exportClasses(OutputSchema) exportClasses(Parameter) exportClasses(PrimitiveSingleEnum) exportClasses(Process) exportClasses(ProcessRequirement) exportClasses(ProcessRequirementList) exportClasses(SBGWorkflow) exportClasses(ScatterFeatureRequirement) exportClasses(Schema) exportClasses(SchemaDef) exportClasses(SchemaDefList) exportClasses(SchemaList) exportClasses(SubworkflowFeatureRequirement) exportClasses(Tool) exportClasses(Workflow) exportClasses(WorkflowOutputParameter) exportClasses(WorkflowOutputParameterList) exportClasses(WorkflowStep) exportClasses(WorkflowStepInput) exportClasses(WorkflowStepInputList) exportClasses(WorkflowStepList) exportClasses(WorkflowStepOutput) exportClasses(WorkflowStepOutputList) exportClasses(characterORCommandLineBindingList) exportClasses(enum) exportMethods("%>>%") exportMethods("+") exportMethods(link) exportMethods(link_what) import(httr) import(methods) importClassesFrom(S4Vectors,List) importClassesFrom(S4Vectors,SimpleList) importClassesFrom(objectProperties,Enum) importClassesFrom(objectProperties,SingleEnum) importFrom(S4Vectors,elementType) importFrom(S4Vectors,endoapply) importFrom(curl,curl_escape) importFrom(data.table,rbindlist) importFrom(docopt,docopt) importFrom(jsonlite,fromJSON) importFrom(jsonlite,prettify) importFrom(jsonlite,toJSON) importFrom(jsonlite,unbox) importFrom(objectProperties,setSingleEnum) importFrom(stats,setNames) importFrom(stringr,str_match) importFrom(stringr,str_trim) importFrom(utils,browseURL) importFrom(utils,download.file) importFrom(utils,modifyList) importFrom(utils,untar) importFrom(uuid,UUIDgenerate) importFrom(yaml,as.yaml) importFrom(yaml,yaml.load) importFrom(yaml,yaml.load_file)