This is just for conformance with the "Writing R Extensions" manual
which recommends to use `"${R_HOME}/bin${R_ARCH_BIN}/Rscript"` rather
than `"${R_HOME}/bin/R" --vanilla --slave` for running R code in
Makevars files.
Hervé Pagès authored on 14/07/2020 20:41:22
| ... | ... |
@@ -4,10 +4,10 @@ |
| 4 | 4 |
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| 5 | 5 |
include Makevars.common |
| 6 | 6 |
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| 7 |
-RHTSLIB_LIBS=$(shell echo 'Rhtslib::pkgconfig("PKG_LIBS")'|\
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- "${R_HOME}/bin/R" --vanilla --slave)
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-RHTSLIB_CPPFLAGS=$(shell echo 'Rhtslib::pkgconfig("PKG_CPPFLAGS")'|\
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| 10 |
- "${R_HOME}/bin/R" --vanilla --slave)
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+RHTSLIB_LIBS=$(shell "${R_HOME}/bin${R_ARCH_BIN}/Rscript" -e \
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+ 'Rhtslib::pkgconfig("PKG_LIBS")')
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+RHTSLIB_CPPFLAGS=$(shell "${R_HOME}/bin${R_ARCH_BIN}/Rscript" -e \
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+ 'Rhtslib::pkgconfig("PKG_CPPFLAGS")')
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| 11 | 11 |
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| 12 | 12 |
PKG_LIBS=$(RHTSLIB_LIBS) |
| 13 | 13 |
PKG_CPPFLAGS=$(RHTSLIB_CPPFLAGS) |