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Package: seqbias
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Version: 1.42.0
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Date: 2019-10-12
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Title: Estimation of per-position bias in high-throughput sequencing
data
Description: This package implements a model of per-position sequencing
bias in high-throughput sequencing data using a simple Bayesian
network, the structure and parameters of which are trained on a
set of aligned reads and a reference genome sequence.
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Author: Daniel Jones <dcjones@cs.washington.edu>
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Maintainer: Daniel Jones <dcjones@cs.washington.edu>
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Depends: R (>= 3.0.2), GenomicRanges (>= 0.1.0), Biostrings (>=
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2.15.0), methods
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LinkingTo: Rhtslib (>= 1.15.3)
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SystemRequirements: GNU make
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Suggests: Rsamtools, ggplot2
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LazyLoad: yes
License: LGPL-3
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biocViews: Sequencing
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