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  • 701c577 (HEAD -> master, origin/master, origin/HEAD) Version bump by Davide Risso <risso.davide@gmail.com> 2022-11-18 18:12:17 +0100;
  • 6d27294 Migrate from BatchJobs to batchtools following BiocParallel deprecation by Davide Risso <risso.davide@gmail.com> 2022-11-18 18:11:57 +0100;
  • ae134cc bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:15:00 -0400;
  • ce782b3 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:15:00 -0400;
  • ff3a800 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:38:13 +0000;
  • eb71c4f (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:38:13 +0000;
  • 73bf4da bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:32:11 +0000;
  • 80329bd (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:32:11 +0000;
  • 21cbec3 Remove unneeded function import by Davide Risso <risso.davide@gmail.com> 2021-09-16 11:00:34 +0200;
  • e028b2e (origin/RELEASE_3_13, RELEASE_3_13) Update NEWS by Davide Risso <risso.davide@gmail.com> 2021-07-21 10:27:03 +0200;
  • ba813dd Remove Seurat dependency by Davide Risso <risso.davide@gmail.com> 2021-07-07 18:04:09 +0200;
  • 3d9ccf4 Edit vignette by Davide Risso <risso.davide@gmail.com> 2021-07-07 17:48:24 +0200;
  • 840114a Update GHA by Davide Risso <risso.davide@gmail.com> 2021-07-06 18:55:39 +0200;
  • 41e643d Version bump by Davide Risso <risso.davide@gmail.com> 2021-07-06 18:29:54 +0200;
  • db52ab8 Update PsiNorm vignette by Davide Risso <risso.davide@gmail.com> 2021-07-06 18:27:16 +0200;
  • 4a7984d Export PSINORM_FN wrapper by Davide Risso <risso.davide@gmail.com> 2021-07-06 17:04:26 +0200;
  • 6bf8d69 Update NEWS by Davide Risso <risso.davide@gmail.com> 2021-07-21 10:27:03 +0200;
  • 2d58c40 Remove Seurat dependency by Davide Risso <risso.davide@gmail.com> 2021-07-07 18:04:09 +0200;
  • 59cd9fb Edit vignette by Davide Risso <risso.davide@gmail.com> 2021-07-07 17:48:24 +0200;
  • 92311a5 Update GHA by Davide Risso <risso.davide@gmail.com> 2021-07-06 18:55:39 +0200;
  • 36d376a Version bump by Davide Risso <risso.davide@gmail.com> 2021-07-06 18:29:54 +0200;
  • d9bb00b Update PsiNorm vignette by Davide Risso <risso.davide@gmail.com> 2021-07-06 18:27:16 +0200;
  • 8abd2f5 Export PSINORM_FN wrapper by Davide Risso <risso.davide@gmail.com> 2021-07-06 17:04:26 +0200;
  • 3649143 Fix typo in PsiNorm manual page by Davide Risso <risso.davide@gmail.com> 2021-07-06 17:04:07 +0200;
  • 2bcc746 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:25:07 +0000;
  • ad9c08b bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:25:07 +0000;
  • f12d5e6 Bump version by Davide Risso <risso.davide@gmail.com> 2021-05-07 10:26:12 +0200;
  • 6492c88 Rescale PsiNorm normalized data in wrapper by Davide Risso <risso.davide@gmail.com> 2021-05-07 10:25:41 +0200;
  • 3feef5f Add PsiNorm wrapper by Davide Risso <risso.davide@gmail.com> 2021-05-07 10:16:43 +0200;
  • 8aeeec5 Avoid inverse by Davide Risso <risso.davide@gmail.com> 2021-05-07 10:16:21 +0200;
  • d8443e6 Remove duplicate cluster dependency by Davide Risso <risso.davide@gmail.com> 2021-05-06 16:11:16 +0200;
  • 76db4ba Remove lazy loading by Davide Risso <risso.davide@gmail.com> 2021-05-06 15:00:20 +0200;
  • 5c7b309 Bump version by Davide Risso <risso.davide@gmail.com> 2021-05-06 14:53:04 +0200;
  • a26bc47 Add PsiNorm normalization by Davide Risso <risso.davide@gmail.com> 2021-05-06 12:59:52 +0200;
  • a9745cf Update README by Davide Risso <risso.davide@gmail.com> 2021-05-06 12:43:14 +0200;
  • d02cf5f Add GHA by Davide Risso <risso.davide@gmail.com> 2021-05-06 11:23:58 +0200;
  • 6deba0b Update roxygen by Davide Risso <risso.davide@gmail.com> 2021-05-06 11:23:38 +0200;
  • dcd4227 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:20:29 -0400;
  • 3fa8d6b (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:20:29 -0400;
  • 0521146 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:04:21 +0000;
  • a562a9e (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:04:21 +0000;
  • 83d07d5 Fix error due to change in scran by Davide Risso <risso.davide@gmail.com> 2019-11-25 18:40:59 +0100;
  • 268bee7 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:42:12 -0400;
  • 41dbdaf (origin/RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:10:15 -0400;
  • 82e9a90 Adding test dependencies as Suggests by Davide Risso <risso.davide@gmail.com> 2019-10-07 16:54:22 +0200;
  • c3a5caa Minor change by Davide Risso <risso.davide@gmail.com> 2019-10-07 16:38:04 +0200;
  • 6143eda Updated vignette to use new scRNAseq package by Davide Risso <risso.davide@gmail.com> 2019-10-07 16:37:09 +0200;
  • 57a48a9 Regenerate man pages by Davide Risso <risso.davide@gmail.com> 2019-10-07 16:18:05 +0200;
  • f036ea0 Change maintainer by Davide Risso <risso.davide@gmail.com> 2019-10-07 16:14:10 +0200;
  • afcede6 Remove deprecation by Davide Risso <risso.davide@gmail.com> 2019-10-07 16:13:19 +0200;
  • 2a843eb Fix test by Davide Risso <risso.davide@gmail.com> 2019-10-07 16:12:49 +0200;
  • 3a7962e Package deprecation by lshep <lori.shepherd@roswellpark.org> 2019-08-02 10:19:37 -0400;
  • 23c1e40 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:14:04 -0400;
  • 4d72c47 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:54:04 -0400;
  • ad564e5 (origin/RELEASE_3_8, RELEASE_3_8) Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:48:56 -0500;
  • 56f9c5f Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:48:53 -0500;
  • 5bfbda6 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:37 -0400;
  • fbb3c96 bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:42:03 -0400;
  • 708baab replace BiocInstaller biocLite mentions with BiocManager by LiNk-NY <mramos09@gmail.com> 2018-08-30 13:55:57 -0400;
  • 6695ff4 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:42 -0400;
  • 6360243 (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:44 -0400;
  • e2436a3 bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:54:30 -0400;
  • 49ae3d9 (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:41:24 -0400;
  • 5d341a1 Merge to origin/master by mbcole <mbeloc@gmail.com> 2017-10-19 16:32:18 -0700;
  • 841743f Merge branch 'release/v1.1.3' by mbcole <mbeloc@gmail.com> 2017-10-19 16:01:11 -0700;
  • af3da30 scone_1.1.3 by mbcole <mbeloc@gmail.com> 2017-10-19 13:52:03 -0700;
  • 9b3474b Vignette update by mbcole <mbeloc@gmail.com> 2017-10-19 12:19:26 -0700;
  • 37faf22 Fix bug in shiny app by Davide Risso <dar2062@med.cornell.edu> 2017-10-16 11:17:51 -0400;
  • b47aadb BUGFIX: stratified_cor computation by mbcole <mbeloc@gmail.com> 2017-09-25 17:18:37 -0700;
  • 633b426 EXP_.._COR methods now measure R^2 by mbcole <mbeloc@gmail.com> 2017-09-13 16:48:47 -0700;
  • 07994f4 added stratified_cor and passed stratified_rle/cor via scone by mbcole <mbeloc@gmail.com> 2017-09-12 15:55:50 -0700;
  • 0477084 Added stratified_rle by mbcole <mbeloc@gmail.com> 2017-09-12 15:19:03 -0700;
  • 4e89555 Merge pull request <a href="#89">#89</a> from HenrikBengtsson/bugfix/if-error by Michael <mbeloc@gmail.com> 2017-09-08 12:12:33 -0700;
  • 5ce7fb0 BUG FIX: if (rezero) { } was called with length(rezero) > 1 by hb <hb@aroma-project.org> 2017-09-06 07:39:48 -0700;
  • 16e5f66 NEWS by Michael Cole <mbeloc@gmail.com> 2017-07-03 16:10:13 +0000;
  • a5a9f94 Bump version for merge to master by Michael Cole <mbeloc@gmail.com> 2017-07-03 16:10:05 +0000;
  • eab7aae remove EDASeq and scran dependencies by Michael Cole <mbeloc@gmail.com> 2017-07-03 16:09:57 +0000;
  • b910947 Shiny app packages to Suggests: by Michael Cole <mbeloc@gmail.com> 2017-07-03 16:09:48 +0000;
  • ff750d0 shiny and miniUI in Suggests: by Michael Cole <mbeloc@gmail.com> 2017-07-03 16:09:40 +0000;
  • 482fd93 NEWS by Davide Risso <dar2062@med.cornell.edu> 2017-07-03 12:08:32 -0400;
  • cf2972f Bump version for merge to master by Davide Risso <dar2062@med.cornell.edu> 2017-07-03 12:00:39 -0400;
  • 0d72009 remove EDASeq and scran dependencies by Davide Risso <dar2062@med.cornell.edu> 2017-06-30 18:14:15 -0400;
  • d415a9d Shiny app packages to Suggests: by Davide Risso <dar2062@med.cornell.edu> 2017-06-30 17:47:09 -0400;
  • 3a7e0cb shiny and miniUI in Suggests: by Davide Risso <dar2062@med.cornell.edu> 2017-06-30 17:29:49 -0400;
  • 9655443 Bump version for develop by Davide Risso <dar2062@med.cornell.edu> 2017-06-30 17:22:18 -0400;
  • befc263 NEWS and version bump by Michael Cole <mbeloc@gmail.com> 2017-06-30 21:16:11 +0000;
  • fef42ec Missing documentation file by Michael Cole <mbeloc@gmail.com> 2017-06-30 21:16:05 +0000;
  • fe06227 Added documentation for fast fnr by Michael Cole <mbeloc@gmail.com> 2017-06-30 21:15:56 +0000;
  • 8016a1d Added fast ziber by Michael Cole <mbeloc@gmail.com> 2017-06-30 21:15:48 +0000;
  • 3f36731 Back to R 3.4 (for merge with bioc) by Davide Risso <dar2062@med.cornell.edu> 2017-06-30 16:20:12 -0400;
  • 9b88f6d NEWS and version bump by Davide Risso <dar2062@med.cornell.edu> 2017-06-30 16:19:06 -0400;
  • e1d8b62 Merge branch 'develop' by Davide Risso <dar2062@med.cornell.edu> 2017-06-30 16:14:32 -0400;
  • da7ecb1 Missing documentation file by mbcole <mbeloc@gmail.com> 2017-05-12 01:33:21 -0700;
  • b05fe70 Added documentation for fast fnr by mbcole <mbeloc@gmail.com> 2017-05-12 00:16:22 -0700;
  • 6f3126b Added fast ziber by mbcole <mbeloc@gmail.com> 2017-05-12 00:08:59 -0700;
  • 958f238 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • aa09217 (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • 51ad187 bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • 51f3f55 Merged from Github master by Michael Cole <mbeloc@gmail.com> 2017-04-09 02:09:09 +0000;
  • 9a8b7a1 Remove vignette html by Davide Risso <risso.davide@gmail.com> 2017-04-08 19:28:19 -0400;