1 | 1 |
deleted file mode 100644 |
... | ... |
@@ -1,42 +0,0 @@ |
1 |
-#---------------------------------------------------------------- |
|
2 |
-# Travis-CI configuration for Bioconductor packages |
|
3 |
-# |
|
4 |
-# REFERENCES: |
|
5 |
-# * Travis CI: https://travis-ci.org/ |
|
6 |
-# * tutorial: https://docs.travis-ci.com/user/languages/r |
|
7 |
-# * see also: https://blog.rstudio.org/2016/03/09/r-on-travis-ci/ |
|
8 |
-# * covr: https://github.com/jimhester/covr |
|
9 |
-# * Coveralls: https://coveralls.io/ |
|
10 |
-# |
|
11 |
-# Validate your .travis.yml file at http://lint.travis-ci.org/ |
|
12 |
-#---------------------------------------------------------------- |
|
13 |
-language: r |
|
14 |
-cache: packages |
|
15 |
- |
|
16 |
-# R versions to be tested on |
|
17 |
-r: |
|
18 |
- - bioc-release |
|
19 |
- - bioc-devel |
|
20 |
- |
|
21 |
-## Turn this to true before submission to CRAN/Bioconductor |
|
22 |
-warnings_are_errors: false |
|
23 |
- |
|
24 |
-# r_build_args: "--no-build-vignettes" |
|
25 |
-# r_check_args: "--no-vignettes" |
|
26 |
- |
|
27 |
-notifications: |
|
28 |
- email: |
|
29 |
- on_success: change |
|
30 |
- on_failure: change |
|
31 |
- |
|
32 |
-## Code coverage |
|
33 |
-r_packages: |
|
34 |
- - covr |
|
35 |
- |
|
36 |
-## BiocCheck |
|
37 |
-bioc_packages: |
|
38 |
- - BiocCheck |
|
39 |
- |
|
40 |
-after_success: |
|
41 |
- - Rscript -e 'library(covr); codecov()' |
|
42 |
- - R CMD BiocCheck . |
... | ... |
@@ -21,8 +21,8 @@ r: |
21 | 21 |
## Turn this to true before submission to CRAN/Bioconductor |
22 | 22 |
warnings_are_errors: false |
23 | 23 |
|
24 |
-r_build_args: "--no-build-vignettes" |
|
25 |
-r_check_args: "--no-vignettes" |
|
24 |
+# r_build_args: "--no-build-vignettes" |
|
25 |
+# r_check_args: "--no-vignettes" |
|
26 | 26 |
|
27 | 27 |
notifications: |
28 | 28 |
email: |
1 | 1 |
new file mode 100644 |
... | ... |
@@ -0,0 +1,42 @@ |
1 |
+#---------------------------------------------------------------- |
|
2 |
+# Travis-CI configuration for Bioconductor packages |
|
3 |
+# |
|
4 |
+# REFERENCES: |
|
5 |
+# * Travis CI: https://travis-ci.org/ |
|
6 |
+# * tutorial: https://docs.travis-ci.com/user/languages/r |
|
7 |
+# * see also: https://blog.rstudio.org/2016/03/09/r-on-travis-ci/ |
|
8 |
+# * covr: https://github.com/jimhester/covr |
|
9 |
+# * Coveralls: https://coveralls.io/ |
|
10 |
+# |
|
11 |
+# Validate your .travis.yml file at http://lint.travis-ci.org/ |
|
12 |
+#---------------------------------------------------------------- |
|
13 |
+language: r |
|
14 |
+cache: packages |
|
15 |
+ |
|
16 |
+# R versions to be tested on |
|
17 |
+r: |
|
18 |
+ - bioc-release |
|
19 |
+ - bioc-devel |
|
20 |
+ |
|
21 |
+## Turn this to true before submission to CRAN/Bioconductor |
|
22 |
+warnings_are_errors: false |
|
23 |
+ |
|
24 |
+r_build_args: "--no-build-vignettes" |
|
25 |
+r_check_args: "--no-vignettes" |
|
26 |
+ |
|
27 |
+notifications: |
|
28 |
+ email: |
|
29 |
+ on_success: change |
|
30 |
+ on_failure: change |
|
31 |
+ |
|
32 |
+## Code coverage |
|
33 |
+r_packages: |
|
34 |
+ - covr |
|
35 |
+ |
|
36 |
+## BiocCheck |
|
37 |
+bioc_packages: |
|
38 |
+ - BiocCheck |
|
39 |
+ |
|
40 |
+after_success: |
|
41 |
+ - bash <(curl -s https://codecov.io/bash) |
|
42 |
+ - R CMD BiocCheck . |
1 | 1 |
new file mode 100644 |
... | ... |
@@ -0,0 +1,42 @@ |
1 |
+#---------------------------------------------------------------- |
|
2 |
+# Travis-CI configuration for Bioconductor packages |
|
3 |
+# |
|
4 |
+# REFERENCES: |
|
5 |
+# * Travis CI: https://travis-ci.org/ |
|
6 |
+# * tutorial: https://docs.travis-ci.com/user/languages/r |
|
7 |
+# * see also: https://blog.rstudio.org/2016/03/09/r-on-travis-ci/ |
|
8 |
+# * covr: https://github.com/jimhester/covr |
|
9 |
+# * Coveralls: https://coveralls.io/ |
|
10 |
+# |
|
11 |
+# Validate your .travis.yml file at http://lint.travis-ci.org/ |
|
12 |
+#---------------------------------------------------------------- |
|
13 |
+language: r |
|
14 |
+cache: packages |
|
15 |
+ |
|
16 |
+# R versions to be tested on |
|
17 |
+r: |
|
18 |
+ - bioc-release |
|
19 |
+ - bioc-devel |
|
20 |
+ |
|
21 |
+## Turn this to true before submission to CRAN/Bioconductor |
|
22 |
+warnings_are_errors: false |
|
23 |
+ |
|
24 |
+r_build_args: "--no-build-vignettes" |
|
25 |
+r_check_args: "--no-vignettes" |
|
26 |
+ |
|
27 |
+notifications: |
|
28 |
+ email: |
|
29 |
+ on_success: change |
|
30 |
+ on_failure: change |
|
31 |
+ |
|
32 |
+## Code coverage |
|
33 |
+r_packages: |
|
34 |
+ - covr |
|
35 |
+ |
|
36 |
+## BiocCheck |
|
37 |
+bioc_packages: |
|
38 |
+ - BiocCheck |
|
39 |
+ |
|
40 |
+after_success: |
|
41 |
+ - Rscript -e 'covr::coveralls()' |
|
42 |
+ - R CMD BiocCheck . |