@@ -1,5 +1,5 @@

 Package: scone

-Version: 1.1.2

+Version: 1.1.2-9001

 Title: Single Cell Overview of Normalized Expression data

 Description: SCONE is an R package for comparing and ranking the performance of

 	different normalization schemes for single-cell RNA-seq and other 

@@ -625,7 +625,7 @@ sconeReport = function(x, methods,

              fill = cc[sort(unique(factor(strat_col())))])

     })

-    output$plot3d_base <- shiny::renderPlotly({

+    output$plot3d_base <- plotly::renderPlotly({

       PC1 <- PC2 <- PC3 <- NULL

       df <- setNames(data.frame(pc_obj_base()$x[,1:3]),

                      c("PC1", "PC2", "PC3"))

@@ -665,7 +665,7 @@ sconeReport = function(x, methods,

       abs(cor(qc,pc_obj_base()$x))

     })

-    output$qccorPlot <- shiny::renderPlotly({

+    output$qccorPlot <- plotly::renderPlotly({

       metric <- value <- PC <- NULL

       df = reshape2::melt(cor_qc()[,1:input$dim])

@@ -696,7 +696,7 @@ sconeReport = function(x, methods,

              fill = cc[sort(unique(factor(strat_col())))])

     })

-    output$plot3d_qc <- shiny::renderPlotly({

+    output$plot3d_qc <- plotly::renderPlotly({

       if(ncol(pc_obj_qc()$x) >= 3){

         PC1 <- PC2 <- PC3 <- NULL

         df <- setNames(data.frame(pc_obj_qc()$x[,1:3]),