man/get_bio.Rd
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 % Generated by roxygen2: do not edit by hand
 % Please edit documentation in R/AllGenerics.R, R/helper.R
 \docType{methods}
 \name{get_bio}
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 \alias{get_bio}
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 \alias{get_batch}
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 \alias{get_bio,SconeExperiment-method}
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 \alias{get_batch,SconeExperiment-method}
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 \alias{get_batch}
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 \alias{get_bio,SconeExperiment-method}
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 \alias{get_batch,SconeExperiment-method}
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 \title{Get Factor of Biological Conditions and Batch}
 \usage{
 get_bio(x)
 
 get_batch(x)
 
 \S4method{get_bio}{SconeExperiment}(x)
 
 \S4method{get_batch}{SconeExperiment}(x)
 }
 \arguments{
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 \item{x}{an object of class \code{\link{SconeExperiment}}.}
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 }
 \value{
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 NULL or a factor containing bio or batch covariate.
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 }
 \description{
 Get Factor of Biological Conditions and Batch
 }
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 \examples{
 set.seed(42)
 mat <- matrix(rpois(500, lambda = 5), ncol=10)
 colnames(mat) <- paste("X", 1:ncol(mat), sep="")
 obj <- SconeExperiment(mat, bio = factor(rep(c(1,2),each = 5)),
            batch = factor(rep(c(1,2),times = 5)))
 bio = get_bio(obj)
 batch = get_batch(obj)
 
 }