# Generated by roxygen2: do not edit by hand

S3method(remove_unwanted_variation,data.frame)
S3method(sccomp_glm,DFrame)
S3method(sccomp_glm,Seurat)
S3method(sccomp_glm,SingleCellExperiment)
S3method(sccomp_glm,data.frame)
S3method(sccomp_predict,data.frame)
S3method(sccomp_replicate,data.frame)
S3method(simulate_data,data.frame)
S3method(test_contrasts,data.frame)
export(plot_summary)
export(remove_unwanted_variation)
export(sccomp_glm)
export(sccomp_predict)
export(sccomp_replicate)
export(simulate_data)
export(test_contrasts)
import(Rcpp)
import(SeuratObject)
import(dplyr)
import(ggplot2)
import(lifecycle)
import(methods)
import(rstantools)
importFrom(RcppParallel,CxxFlags)
importFrom(RcppParallel,RcppParallelLibs)
importFrom(SingleCellExperiment,colData)
importFrom(SingleCellExperiment,counts)
importFrom(boot,logit)
importFrom(dplyr,case_when)
importFrom(dplyr,cummean)
importFrom(dplyr,distinct_at)
importFrom(dplyr,enquo)
importFrom(dplyr,last_col)
importFrom(dplyr,left_join)
importFrom(dplyr,select)
importFrom(dplyr,with_groups)
importFrom(forcats,fct_relevel)
importFrom(forcats,fct_reorder)
importFrom(ggrepel,geom_text_repel)
importFrom(glue,glue)
importFrom(magrittr,"%$%")
importFrom(magrittr,divide_by)
importFrom(magrittr,equals)
importFrom(magrittr,extract2)
importFrom(magrittr,multiply_by)
importFrom(magrittr,set_rownames)
importFrom(magrittr,subtract)
importFrom(parallel,detectCores)
importFrom(patchwork,wrap_plots)
importFrom(purrr,as_mapper)
importFrom(purrr,imap)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map2_dfc)
importFrom(purrr,map2_lgl)
importFrom(purrr,map_chr)
importFrom(purrr,map_dbl)
importFrom(purrr,map_dfc)
importFrom(purrr,map_dfr)
importFrom(purrr,map_int)
importFrom(purrr,map_lgl)
importFrom(purrr,pmap)
importFrom(purrr,when)
importFrom(readr,read_file)
importFrom(rlang,":=")
importFrom(rlang,enquo)
importFrom(rlang,ensym)
importFrom(rlang,quo_is_null)
importFrom(rlang,quo_is_symbolic)
importFrom(rlang,quo_name)
importFrom(rlang,quo_squash)
importFrom(rlang,set_names)
importFrom(rstan,Rhat)
importFrom(rstan,extract)
importFrom(rstan,sampling)
importFrom(rstan,sflist2stanfit)
importFrom(rstan,stan_model)
importFrom(rstan,summary)
importFrom(rstan,vb)
importFrom(scales,trans_new)
importFrom(stats,C)
importFrom(stats,model.matrix)
importFrom(stats,quantile)
importFrom(stats,setNames)
importFrom(stringr,str_detect)
importFrom(stringr,str_remove_all)
importFrom(stringr,str_replace)
importFrom(stringr,str_split)
importFrom(stringr,str_subset)
importFrom(tibble,add_column)
importFrom(tibble,as_tibble)
importFrom(tibble,deframe)
importFrom(tibble,enframe)
importFrom(tibble,rowid_to_column)
importFrom(tidyr,complete)
importFrom(tidyr,drop_na)
importFrom(tidyr,expand_grid)
importFrom(tidyr,gather)
importFrom(tidyr,nest)
importFrom(tidyr,nesting)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,replace_na)
importFrom(tidyr,separate)
importFrom(tidyr,spread)
importFrom(tidyr,unite)
importFrom(tidyr,unnest)
importFrom(tidyselect,eval_select)
importFrom(utils,data)
useDynLib(sccomp, .registration = TRUE)