Name Mode Size
.github 040000
R 040000
man 040000
tests 040000
vignettes 040000
.Rbuildignore 100644 0 kb
.gitignore 100644 0 kb
DESCRIPTION 100644 2 kb
NAMESPACE 100644 2 kb 100644 1 kb
# scTreeViz This package provides methods to interactively explore and visualize datasets with hierarchies. eg. single cells datasets with hierarchy over cells at different resolutions. For a walk through of various features of the app, checkout the vignette at ## Installation and requirements `scTreeViz` currently requires a development version of `epivizrData` which supports Sparse Measurements. We plan to push this to `bioc` soon. To install `scTreeViz`, ```{r} BiocManager::install("epiviz/epivizrData") BiocManager::install("HCBravoLab/scTreeViz") ``` ***Note: you can also use devtools to install the package from github*** ## Usage To try out and explore the various features of the package, we provide the PBMC 3K dataset and the vignette `Explore-PBMC` walks you through the process. To checkout all the vignettes ```{r} library(scTreeViz) browseVignettes("scTreeViz") ```