Graph ofscRepertoire
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  • 89b8b27 (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:10:40 +0000;
  • 7ba1676 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:10:40 +0000;
  • 946c9b6 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:04:48 +0000;
  • 6140f15 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:04:48 +0000;
  • f61c711 (origin/RELEASE_3_13, RELEASE_3_13) Update NEWS by Nick <nicholas-borcherding@uiowa.edu> 2021-06-16 09:41:12 -0500;
  • d9e7dc8 Update DESCRIPTION by Nick <nicholas-borcherding@uiowa.edu> 2021-06-16 09:36:12 -0500;
  • bdf0e5a Merge remote-tracking branch 'upstream/master' by Nick <nicholas-borcherding@uiowa.edu> 2021-06-16 09:35:18 -0500;
  • e637b42 Update Coding Practice by Nick <nicholas-borcherding@uiowa.edu> 2021-06-16 09:31:31 -0500;
  • 9e54abc v1.2.1 by Nick <nicholas-borcherding@uiowa.edu> 2021-06-04 09:57:01 -0500;
  • 78de0b8 Update utils.R by theHumanBorch <ncborch@gmail.com> 2021-06-03 12:07:30 -0500;
  • 36e0b2f Update seuratFunctions.R by theHumanBorch <ncborch@gmail.com> 2021-05-26 14:55:27 -0500;
  • 1e38278 Fix grabMeta() by theHumanBorch <ncborch@gmail.com> 2021-05-25 12:30:47 -0500;
  • 65dcf3a Update clusterTCR.R by theHumanBorch <ncborch@gmail.com> 2021-05-25 07:49:59 -0500;
  • 4b16f0f Update README.md by theHumanBorch <ncborch@gmail.com> 2021-05-20 09:35:51 -0500;
  • 29308b0 Update viz.R by theHumanBorch <ncborch@gmail.com> 2021-05-20 09:31:19 -0500;
  • 009a38f bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:57:38 +0000;
  • 1daa495 bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:57:38 +0000;
  • 88f4699 Update README.md by theHumanBorch <ncborch@gmail.com> 2021-05-17 17:09:35 -0500;
  • bf381de Update README.md by theHumanBorch <ncborch@gmail.com> 2021-05-17 08:22:08 -0500;
  • 2b7020b Merge branch 'dev' into master by theHumanBorch <ncborch@gmail.com> 2021-05-15 13:09:46 -0500;
  • c2ca906 CombineTCR() fix by Nick <nicholas-borcherding@uiowa.edu> 2021-05-10 07:48:34 -0500;
  • c515e7f CombineTCR() issue by Nick <nicholas-borcherding@uiowa.edu> 2021-05-09 07:38:47 -0500;
  • 251ef77 adding else by Nick <nicholas-borcherding@uiowa.edu> 2021-05-07 06:01:39 -0500;
  • 6aa3b5d Fix bad description file by Lori Shepherd <lori.shepherd@roswellpark.org> 2021-05-05 16:25:58 -0400;
  • d5965eb Update utils.R by Nick <nicholas-borcherding@uiowa.edu> 2021-04-26 08:22:19 -0500;
  • 0b42112 Update parseTCR by Nick <nicholas-borcherding@uiowa.edu> 2021-04-24 06:39:21 -0500;
  • c4f6ad7 Update utils.R by Nick <nicholas-borcherding@uiowa.edu> 2021-04-14 08:06:26 -0500;
  • 50b10c3 Update clusterTCR.R by Nick <nicholas-borcherding@uiowa.edu> 2021-04-09 12:49:26 -0500;
  • e2d079a Update clusterTCR.R by Nick <nicholas-borcherding@uiowa.edu> 2021-04-09 08:58:19 -0500;
  • 96cc073 Update clusterTCR.R by Nick <nicholas-borcherding@uiowa.edu> 2021-04-09 08:24:58 -0500;
  • bcdad5b Update vignette.Rmd by Nick <nicholas-borcherding@uiowa.edu> 2021-04-08 14:44:59 -0500;
  • 410d4f1 v1.0.3 Commit by Nick <nicholas-borcherding@uiowa.edu> 2021-04-08 12:40:20 -0500;
  • 5b2886b Updating Diversity Downsampling by Nick <nicholas-borcherding@uiowa.edu> 2021-04-08 12:10:06 -0500;
  • 2ccb760 Update DESCRIPTION by theHumanBorch <ncborch@gmail.com> 2021-03-29 07:52:34 -0500;
  • 7be706e (origin/RELEASE_3_12, RELEASE_3_12) Update DESCRIPTION by theHumanBorch <ncborch@gmail.com> 2021-03-28 12:56:34 -0500;
  • 4a81ebf Merge remote-tracking branch 'origin/RELEASE_3_12' by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:54:30 -0500;
  • ffed3a6 Update DESCRIPTION by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:52:49 -0500;
  • df63dab Update DESCRIPTION by theHumanBorch <ncborch@gmail.com> 2021-03-28 12:42:14 -0500;
  • c7a91f1 Merge branch 'master' of https://github.com/ncborcherding/scRepertoire by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:40:39 -0500;
  • c9a6fda Merge pull request <a href="#70">#70</a> from ncborcherding/master by theHumanBorch <ncborch@gmail.com> 2021-03-28 12:39:45 -0500;
  • 09269c6 Merge branch 'RELEASE_3_12' into master by theHumanBorch <ncborch@gmail.com> 2021-03-28 12:39:33 -0500;
  • 4464c45 Update DESCRIPTION by theHumanBorch <ncborch@gmail.com> 2021-03-28 12:38:23 -0500;
  • 4df8383 Merge remote-tracking branch 'origin/RELEASE_3_12' by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:36:05 -0500;
  • e728af1 Update DESCRIPTION by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:35:32 -0500;
  • 53e2d40 Merge remote-tracking branch 'upstream/RELEASE_3_12' by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:35:30 -0500;
  • b5a1307 Update NEWS by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:08:37 -0500;
  • fd05156 Update diversity.R by Nick <nicholas-borcherding@uiowa.edu> 2021-03-28 12:07:55 -0500;
  • a902213 Update DESCRIPTION by Nick <nicholas-borcherding@uiowa.edu> 2021-03-25 12:50:11 -0500;
  • 1af1295 v1.2 by Nick <nicholas-borcherding@uiowa.edu> 2021-03-25 12:46:32 -0500;
  • e182ada update annotation by Nick <nicholas-borcherding@uiowa.edu> 2021-03-06 14:18:01 -0600;
  • 56d6cf4 Update seuratFunctions.R by Nick <nicholas-borcherding@uiowa.edu> 2021-03-06 07:14:51 -0600;
  • 13e9870 clonalOverlay() function by Nick <nicholas-borcherding@uiowa.edu> 2021-02-27 11:28:09 -0600;
  • ce2b228 Update vignette by Nick <nicholas-borcherding@uiowa.edu> 2021-02-26 09:05:21 -0600;
  • 96ea64b Update clusterTCR.R by Nick <nicholas-borcherding@uiowa.edu> 2021-02-25 16:50:55 -0600;
  • 44f3fd2 update utils by Nick <nicholas-borcherding@uiowa.edu> 2021-02-25 15:54:14 -0600;
  • 95ab0ff Merge branch 'dev' of https://github.com/ncborcherding/scRepertoire into dev by Nick <nicholas-borcherding@uiowa.edu> 2021-02-25 15:37:04 -0600;
  • 7a99c9d Merge pull request <a href="#61">#61</a> from ncborcherding/refine by theHumanBorch <ncborch@gmail.com> 2021-02-25 15:36:33 -0600;
  • 415c421 Merge branch 'dev' of https://github.com/ncborcherding/scRepertoire into dev by Nick <nicholas-borcherding@uiowa.edu> 2021-02-25 15:34:26 -0600;
  • 282ed7f Update README.md by theHumanBorch <ncborch@gmail.com> 2021-02-25 15:06:35 -0600;
  • 07e3d4f Update README.md by theHumanBorch <ncborch@gmail.com> 2021-02-25 15:05:54 -0600;
  • d2d190d Merge branch 'dev' into refine by theHumanBorch <ncborch@gmail.com> 2021-02-25 15:04:59 -0600;
  • 3b3fbad Devtools::check() by Nick <nicholas-borcherding@uiowa.edu> 2021-02-20 09:28:07 -0600;
  • 0007d2b Update vignette.Rmd by Nick <nicholas-borcherding@uiowa.edu> 2021-02-20 08:53:22 -0600;
  • a5fe99c Update clusterTCR.R by Nick <nicholas-borcherding@uiowa.edu> 2021-02-19 12:47:43 -0600;
  • 8f9bcef Update clusterTCR.R by Nick <nicholas-borcherding@uiowa.edu> 2021-02-19 12:16:59 -0600;
  • 7d5edb5 Create clusterTCR.R by Nick <nicholas-borcherding@uiowa.edu> 2021-02-19 12:08:18 -0600;
  • 0b37efd Fix LVcompare by Nick <nicholas-borcherding@uiowa.edu> 2021-02-07 14:16:37 -0600;
  • cd80266 Update README.md by theHumanBorch <ncborch@gmail.com> 2021-02-04 10:03:54 -0600;
  • c65e8a8 Update README.md by theHumanBorch <ncborch@gmail.com> 2021-02-01 08:26:17 -0600;
  • ed13317 Update utils.R by theHumanBorch <ncborch@gmail.com> 2021-02-01 08:21:07 -0600;
  • b0ed66d Fix parseBCR by theHumanBorch <ncborch@gmail.com> 2021-01-30 14:25:17 -0600;
  • 909c61e parseBCR fix for 1 chain by theHumanBorch <ncborch@gmail.com> 2021-01-30 14:22:51 -0600;
  • 048e300 Merge pull request <a href="#58">#58</a> from mass-a/master by theHumanBorch <nicholas-borcherding@uiowa.edu> 2021-01-29 09:36:57 -0600;
  • fd575a3 Fix index for multiple alpha/beta chains by Massimo Andreatta <massimo.andreatta@unil.ch> 2021-01-29 16:21:47 +0100;
  • c6c8dde Update utils.R by Nick <nicholas-borcherding@uiowa.edu> 2021-01-22 11:48:02 -0600;
  • f4ad06d adding da truth by Nick <nicholas-borcherding@uiowa.edu> 2021-01-21 14:17:33 -0600;
  • 6535b7f Update vignette.Rmd by Nick <nicholas-borcherding@uiowa.edu> 2021-01-18 10:24:37 -0600;
  • f73fd20 Update seuratFunctions.R by Nick <nicholas-borcherding@uiowa.edu> 2021-01-18 10:14:36 -0600;
  • 531f470 Added proportion to combineExpression by Nick <nicholas-borcherding@uiowa.edu> 2021-01-15 10:45:38 -0600;
  • 4eb39e9 Updating calling of BCR clonotypes by Nick <nicholas-borcherding@uiowa.edu> 2021-01-04 07:44:15 -0600;
  • d02c508 Productive Combine by Nick <nicholas-borcherding@uiowa.edu> 2020-12-12 19:49:45 -0600;
  • 0cbc041 Merge remote-tracking branch 'origin/RELEASE_3_12' into RELEASE_3_12 by Nick <nicholas-borcherding@uiowa.edu> 2020-12-03 05:16:01 -0600;
  • af9fbf7 Update utils.R by Nick <nicholas-borcherding@uiowa.edu> 2020-12-02 14:16:01 -0600;
  • d395bbc Update utils.R by Nick <nicholas-borcherding@uiowa.edu> 2020-12-02 13:36:36 -0600;
  • 320c88b Update combineContigs.R by theHumanBorch <nicholas-borcherding@uiowa.edu> 2020-11-23 12:34:23 -0600;
  • e347c21 Update combineContigs.R by theHumanBorch <nicholas-borcherding@uiowa.edu> 2020-11-23 12:34:23 -0600;
  • c8e8dbe Merge pull request <a href="#45">#45</a> from ncborcherding/master by theHumanBorch <nicholas-borcherding@uiowa.edu> 2020-11-22 04:43:53 -0600;
  • e4d566a Update NEWS by Nick <nicholas-borcherding@uiowa.edu> 2020-11-22 04:34:59 -0600;
  • 054db5e Merge remote-tracking branch 'upstream/master' by Nick <nicholas-borcherding@uiowa.edu> 2020-11-22 04:34:44 -0600;
  • e609786 Update vignette.Rmd by Nick <nicholas-borcherding@uiowa.edu> 2020-11-20 13:06:08 -0600;
  • f20ffe0 Update vignette.Rmd by Nick <nicholas-borcherding@uiowa.edu> 2020-11-20 11:48:04 -0600;
  • 80e2f32 Merge pull request <a href="#44">#44</a> from ncborcherding/refine by theHumanBorch <nicholas-borcherding@uiowa.edu> 2020-11-20 11:24:01 -0600;
  • 5706f38 Update README.md by theHumanBorch <nicholas-borcherding@uiowa.edu> 2020-11-20 11:19:21 -0600;
  • 78cffd3 Update README.md by theHumanBorch <nicholas-borcherding@uiowa.edu> 2020-11-20 11:19:01 -0600;
  • bfa85fb Run BiocCheck() by Nick <nicholas-borcherding@uiowa.edu> 2020-11-20 11:13:12 -0600;
  • 9ea0d61 v1.1 by Nick <nicholas-borcherding@uiowa.edu> 2020-11-20 04:57:05 -0600;
  • 4f3a5c4 Update startrac.R by Nick <nicholas-borcherding@uiowa.edu> 2020-11-11 07:33:09 -0600;
  • bcc2a89 Startrac re-addition by Nick <nicholas-borcherding@uiowa.edu> 2020-11-11 07:27:11 -0600;
  • 1fe6dfd Added startrac by Nick <nicholas-borcherding@uiowa.edu> 2020-11-10 13:21:30 -0600;
  • 7f16d73 Working Out Kinks by Nick <nicholas-borcherding@uiowa.edu> 2020-11-09 15:23:21 -0600;