Name Mode Size
..
FLOSS.R 100644 6 kb
PAmotif.R 100644 2 kb
assignReadingFrame.R 100644 3 kb
codonUsage.R 100644 1 kb
countReads.R 100644 5 kb
coverageDepth.R 100644 8 kb
coverageRates.R 100644 2 kb
cvgd.R 100644 3 kb
estimatePsite.R 100644 4 kb
filterCDS.R 100644 1 kb
fixSeqlevelsStyle.R 100644 0 kb
frameCounts.R 100644 2 kb
getFPKM.R 100644 3 kb
getORFscore.R 100644 2 kb
getPsiteCoordinates.R 100644 3 kb
ggBar.R 100644 1 kb
metaPlot.R 100644 3 kb
normByRUVs.R 100644 3 kb
plotDistance2Codon.R 100644 3 kb
plotFrameDensity.R 100644 1 kb
plotSpliceEvent.R 100644 3 kb
plotTE.R 100644 3 kb
plotTranscript.R 100644 2 kb
prepareCDS.R 100644 5 kb
readsDistribution.R 100644 5 kb
readsEndPlot.R 100644 5 kb
readsLenToKeep.R 100644 1 kb
ribosomeReleaseScore.R 100644 2 kb
shiftReadsByFrame.R 100644 2 kb
simulateRPF.R 100644 18 kb
spliceEvent.R 100644 6 kb
strandPlot.R 100644 2 kb
summaryReadsLength.R 100644 1 kb
translationalEfficiency.R 100644 6 kb
README.md
# ribosomeProfilingQC An R package for quality assessment of ribosome profiling ## Installation To install this package, start R and enter: ```r library(BiocManager) BiocManager::install("jianhong/ribosomeProfilingQC") ``` ## Documentation To view documentation of ribosomeProfilingQC, start R and enter: ```r browseVignettes("ribosomeProfilingQC") ```