# qpgraph: Estimate gene and eQTL networks from high-throughput expression and genotyping assays [](https://bioconductor.org/packages/release/bioc/html/qpgraph.html "How long has been qpgraph in a release of Bioconductor") [](https://bioconductor.org/packages/stats/bioc/qpgraph/ "Ranking by number of downloads. A lower number means the package is downloaded more frequently. Determined within a package type (software, experiment, annotation, workflow) and uses the number of distinct IPs for the last 12 months.") [](https://support.bioconductor.org/t/qpgraph/ "Support site activity on qpgraph, last 6 months: answered posts/total posts.") [](https://github.com/rcastelo/qpgraph/actions?query=workflow%3AR-CMD-check-bioc) [](https://codecov.io/github/rcastelo/qpgraph?branch=master) **Current Bioconductor build status** - `release` [](https://bioconductor.org/packages/release/bioc/html/qpgraph.html#archives "Whether qpgraph release is available on all platforms") [](https://bioconductor.org/packages/release/bioc/html/qpgraph.html#since "Number of recursive dependencies needed to install package") [](https://bioconductor.org/checkResults/devel/bioc-LATEST/qpgraph "Time since last commit, possible values: today, < 1 week, < 1 month, < 3 months, since release, before release") [](https://bioconductor.org/checkResults/release/bioc-LATEST/qpgraph/ "Bioconductor release build") - `development` [](https://bioconductor.org/packages/devel/bioc/html/qpgraph.html#archives "Whether qpgraph devel is available on all platforms") [](https://bioconductor.org/packages/devel/bioc/html/qpgraph.html#since "Number of recursive dependencies needed to install package") [](https://bioconductor.org/checkResults/devel/bioc-LATEST/qpgraph "Time since last commit, possible values: today, < 1 week, < 1 month, < 3 months, since release, before release") [](https://bioconductor.org/checkResults/devel/bioc-LATEST/qpgraph/ "Bioconductor devel build") ## Installation This is the __development__ version of the R/Bioconductor package qpgraph. This version is unstable and should be used only to test new features. If you are looking for the __release__ version of this package please go to its package release landing page at [https://bioconductor.org/packages/qpgraph](https://bioconductor.org/packages/qpgraph) and follow the instructions there to install it. If you were really looking for this development version, then to install it you need first to install the [development version of Bioconductor](https://bioconductor.org/developers/how-to/useDevel) and then type the following line from the R shell: ```r BiocManager::install("qpgraph", version = "devel") ``` Alternatively, you can install it from GitHub using the [remotes](https://github.com/r-lib/remotes "remotes") package. ```r install.packages("remotes") library(remotes) install_github("rcastelo/qpgraph") ``` ## Questions, bug reports and issues For questions and bug reports regarding the __release__ version of **qpgraph** please use the [Bioconductor support site](https://support.bioconductor.org "Bioconductor support site"). For bug reports and issues regarding this __development__ version of **qpgraph** please use the GitHub issues [tab](https://github.com/rcastelo/qpgraph/issues) at the top-left of this page. ## Contributing Contributions to the software codebase of qpgraph are welcome as long as contributors abide to the terms of the [Bioconductor Contributor Code of Conduct](https://bioconductor.org/about/code-of-conduct). If you want to contribute to the development of qpgraph please open an [issue](https://github.com/rcastelo/qpgraph/issues) to start discussing your suggestion or, in case of a bugfix or a straightforward feature, directly a [pull request](https://github.com/rcastelo/qpgraph/pulls). ## Funding This software project is supported in part by the Spanish [Ministry of Science, Innovation and Universities](https://www.ciencia.gob.es).