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  • bcbd646 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:08:31 -0400;
  • 985d8f5 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:08:31 -0400;
  • 40779d8 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:19:24 -0400;
  • 49d700a (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:19:24 -0400;
  • 4e7f31a bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:53:43 +0000;
  • 8a67544 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:53:43 +0000;
  • 70498dd bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:50:03 +0000;
  • d824d8b (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:50:03 +0000;
  • 5cacec1 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:41:44 +0000;
  • 6e68a18 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:41:43 +0000;
  • 26a1fc4 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:43:39 -0400;
  • 38d9c8e (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:43:39 -0400;
  • 532f720 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:24:27 +0000;
  • a63d3a4 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:24:27 +0000;
  • 4af3351 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:43:31 -0400;
  • 23592da (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:11:32 -0400;
  • 077b5a5 (origin/RELEASE_3_9, RELEASE_3_9) update RELEASE version number by August Guang <august.guang@gmail.com> 2019-09-17 16:06:14 -0400;
  • 2c7366d bump version by August Guang <august.guang@gmail.com> 2019-09-17 16:00:19 -0400;
  • 75a9349 revert version bump by August Guang <august.guang@gmail.com> 2019-07-22 21:46:55 -0400;
  • c3b21d7 Merge remote-tracking branch 'upstream/master' by August Guang <august.guang@gmail.com> 2019-07-22 21:12:12 -0400;
  • 7d387e8 Merge branch 'master' of https://github.com/compbiocore/qckitfastq by August Guang <august.guang@gmail.com> 2019-07-22 21:10:16 -0400;
  • b6a2825 travis by August Guang <august.guang@gmail.com> 2019-07-22 16:54:11 -0400;
  • 3c6e827 added aes group by August Guang <august.guang@gmail.com> 2019-07-22 14:27:09 -0400;
  • b46cc33 updated travis by August Guang <august.guang@gmail.com> 2019-07-19 11:32:36 -0400;
  • 16ad3ac Update README.md by august <august.guang@gmail.com> 2019-06-07 15:04:09 -0400;
  • 6bf473a bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:16:27 -0400;
  • 5881ba7 bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:54:14 -0400;
  • c436401 mkdocs by August Guang <august.guang@gmail.com> 2019-04-22 16:19:56 -0400;
  • 373bb1f update version: by August Guang <august.guang@gmail.com> 2019-02-22 10:09:04 -0500;
  • 8efe35b configure.win by August Guang <august.guang@gmail.com> 2019-02-12 16:02:49 -0500;
  • 5030bf6 configure.win by August Guang <august.guang@gmail.com> 2019-02-12 10:00:19 -0500;
  • bf1092b update version by August Guang <august.guang@gmail.com> 2019-02-11 22:14:59 -0500;
  • e07d8e2 modified configure.sh by August Guang <august.guang@gmail.com> 2019-02-11 21:22:42 -0500;
  • 4a2ff3d disabled adapter functions for Windopws by August Guang <august.guang@gmail.com> 2019-02-11 21:11:07 -0500;
  • 4d2e112 removed map and added some ifdef guards for Windows by August Guang <august.guang@gmail.com> 2019-01-25 15:51:22 -0500;
  • 9721f20 update version by August Guang <august.guang@gmail.com> 2019-01-07 14:41:18 -0500;
  • 3f6460d updated vignette yaml by August Guang <august.guang@gmail.com> 2019-01-07 13:29:14 -0500;
  • c7e4cc7 updated vignette to include adapter content by August Guang <august.guang@gmail.com> 2019-01-06 23:07:14 -0500;
  • 7bd37a4 refactoring by August Guang <august.guang@gmail.com> 2019-01-06 22:44:33 -0500;
  • 4703787 perseq_quality by August Guang <august.guang@gmail.com> 2019-01-02 13:18:56 -0500;
  • 0ca33fa caching packages by August Guang <august.guang@gmail.com> 2018-12-26 19:30:31 -0500;
  • 7e552c8 split plot_read_length into read_length and plot by August Guang <august.guang@gmail.com> 2018-12-21 15:19:05 -0500;
  • c743c0c update version number by August Guang <august.guang@gmail.com> 2018-12-17 11:38:05 -0500;
  • 5ab0b96 mistake in example by August Guang <august.guang@gmail.com> 2018-12-17 11:37:30 -0500;
  • 894b9db forgot a testthat file by August Guang <august.guang@gmail.com> 2018-12-05 10:43:49 -0500;
  • 6d3c4df cleaned up code and tests by August Guang <august.guang@gmail.com> 2018-12-05 10:09:33 -0500;
  • 3403ad9 sped up calc_adapter_content with StringSet by August Guang <august.guang@gmail.com> 2018-12-04 11:38:28 -0500;
  • 01d3136 #define STRICT_R_HEADER by August Guang <august.guang@gmail.com> 2018-12-03 17:36:12 -0500;
  • 35f03e1 addressed biocbot build errors by August Guang <august.guang@gmail.com> 2018-12-03 15:21:47 -0500;
  • 7ae8d13 Merge branch 'master' of https://github.com/compbiocore/qckitfastq by August Guang <august.guang@gmail.com> 2018-12-03 10:37:49 -0500;
  • dea38e9 version bump for biocbot by August Guang <august.guang@gmail.com> 2018-12-03 10:37:40 -0500;
  • fd41a8b Update response.md by august <august.guang@gmail.com> 2018-12-01 14:04:18 -0500;
  • 65fe8b4 fixing example issues by August Guang <august.guang@gmail.com> 2018-12-01 03:06:30 -0500;
  • 91c2835 address bioccheck issues by August Guang <august.guang@gmail.com> 2018-11-30 16:23:34 -0500;
  • 86215b6 addressed some bioccheck issues by August Guang <august.guang@gmail.com> 2018-11-29 21:10:24 -0500;
  • dbc4e2a fixed README and added man pages to mkdocs by August Guang <august.guang@gmail.com> 2018-11-29 20:33:43 -0500;
  • 94b8fea added bioccheck to travis and updated readme, description, news by August Guang <august.guang@gmail.com> 2018-11-29 16:07:08 -0500;
  • a6007bd Merge branch 'adapter' by August Guang <august.guang@gmail.com> 2018-11-29 15:23:24 -0500;
  • 9bc8f65 completed response.md by August Guang <august.guang@gmail.com> 2018-11-29 15:23:17 -0500;
  • 00e2310 fixed all notes and errors on adapter functions by August Guang <august.guang@gmail.com> 2018-11-29 14:42:35 -0500;
  • e084861 .travis.yml typo by August Guang <august.guang@gmail.com> 2018-11-29 13:44:21 -0500;
  • 6441d5b fixed find_format encoding error and added tests for it by August Guang <august.guang@gmail.com> 2018-11-29 11:57:05 -0500;
  • 09be57e tests, tabulation, plot for adapter content using RSeqAn finished by August Guang <august.guang@gmail.com> 2018-11-28 18:58:21 -0500;
  • 5d6aeac have working adapter_content based off of RSeqAn by August Guang <august.guang@gmail.com> 2018-11-27 19:06:45 -0500;
  • 60fd795 think have working version of adapter_content by August Guang <august.guang@gmail.com> 2018-11-27 17:27:24 -0500;
  • b9ff0f0 fixed some C++ code but scores and formats are broken by August Guang <august.guang@gmail.com> 2018-10-27 14:26:36 -0400;
  • e51edd6 modified c++ code to take into account Illumina quality formats by ashokrags <ashok.ragavendran@gmail.com> 2018-10-03 13:00:27 -0400;
  • f83068d no kableExtra by August Guang <august.guang@gmail.com> 2018-09-29 23:05:30 -0400;
  • 4190a33 still working on getting docs to deploy by August Guang <august.guang@gmail.com> 2018-09-29 14:08:17 -0400;
  • fa6a721 trying with devel branch by August Guang <august.guang@gmail.com> 2018-09-29 13:29:49 -0400;
  • 0bd2938 modified travis for issues with deploy by August Guang <august.guang@gmail.com> 2018-09-28 16:49:54 -0400;
  • 13691dc adding documentation by August Guang <august.guang@gmail.com> 2018-09-28 16:18:20 -0400;
  • 9a52610 updating more documentation issues by August Guang <august.guang@gmail.com> 2018-09-27 15:07:08 -0400;
  • 7e3c18f should have no more notes by August Guang <august.guang@gmail.com> 2018-09-27 14:30:36 -0400;
  • 3486e9e roxygen thought we were returning a link by August Guang <august.guang@gmail.com> 2018-09-27 13:37:11 -0400;
  • f2ea187 addressing R CMD check NOTEs about undefined global variables by August Guang <august.guang@gmail.com> 2018-09-27 12:02:47 -0400;
  • 59a4fed updated and shortened more examples by August Guang <august.guang@gmail.com> 2018-09-27 10:57:45 -0400;
  • 9fd16be forgot to update documentation by August Guang <august.guang@gmail.com> 2018-09-26 17:12:09 -0400;
  • b9761bc fixed examples but several may need to be condensed by August Guang <august.guang@gmail.com> 2018-09-25 13:02:38 -0400;
  • 8e5d22e man pages all updated and plot_overrep_kmer added by August Guang <august.guang@gmail.com> 2018-09-25 00:23:10 -0400;
  • 782987c plot changes and removed writefile args in C++ by August Guang <august.guang@gmail.com> 2018-09-18 12:59:11 -0400;
  • 1510a38 plots appear to be non helpful for actual QC issues and are labeled incorrectly by August Guang <august.guang@gmail.com> 2018-09-14 18:17:41 -0400;
  • 908d254 GC_content output_file=NA instead of NULL by August Guang <august.guang@gmail.com> 2018-09-13 23:00:27 -0400;
  • 38f4c55 cannot put cmds in install step or overrides dependency installation by August Guang <august.guang@gmail.com> 2018-09-13 22:31:11 -0400;
  • 5623462 needed to use sudo but gcc issue should be ok now by August Guang <august.guang@gmail.com> 2018-09-13 22:24:54 -0400;
  • fa6a1a4 bug in configure.sh by August Guang <august.guang@gmail.com> 2018-09-11 16:33:47 -0400;
  • 6e3ff3c forgot a line for travis on gcc-6 by August Guang <august.guang@gmail.com> 2018-09-10 17:04:57 -0400;
  • 213982a added more specific tests for gc content, updated outfile by August Guang <august.guang@gmail.com> 2018-09-06 15:24:11 -0400;
  • 9de7f79 trying some gcc6 solutions by August Guang <august.guang@gmail.com> 2018-08-24 10:25:38 -0400;
  • dd004ef forgot configure script by August Guang <august.guang@gmail.com> 2018-08-24 09:54:03 -0400;
  • d5e0d45 updated travis, basic_stat now per_base_quality, sequence_content by August Guang <august.guang@gmail.com> 2018-08-23 16:01:43 -0400;
  • 403ffe8 more changes to output_file by August Guang <august.guang@gmail.com> 2018-08-14 14:11:56 -0400;
  • 23427dd adapter content needs to be c++ by August Guang <august.guang@gmail.com> 2018-08-14 09:29:49 -0400;
  • c3aeb74 updating test filenames by August Guang <august.guang@gmail.com> 2018-08-09 18:46:59 -0400;
  • 9c812f2 merging by August Guang <august.guang@gmail.com> 2018-08-09 18:40:32 -0400;
  • 0bea562 added travis.yml, updated vignette by August Guang <august.guang@gmail.com> 2018-08-09 18:38:16 -0400;
  • 593992c updated vignette, changed response by August Guang <august.guang@gmail.com> 2018-08-03 08:29:46 -0400;
  • 46e71a1 adapter content function by August Guang <august.guang@gmail.com> 2018-06-12 10:23:10 -0400;
  • d7bcec9 version11 makevar change by winnie0521 <wenyue.xing@brown.edu> 2018-05-10 14:47:25 -0400;
  • 7b15c3c version10 build by winnie0521 <wenyue.xing@brown.edu> 2018-05-09 22:30:20 -0400;