Bioconductor Code: proActiv

Graph of proActiv

635dd63 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:25:31 -0400;
a55e732 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:25:31 -0400;
3506f4e bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:22:38 -0400;
da3d324 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:22:38 -0400;
dc9befb bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:22:49 -0400;
dc9233c (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:22:49 -0400;
b5aeb87 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:08:21 +0000;
e817eaa (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:08:21 +0000;
e9e7e25 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:02:38 +0000;
6198397 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:02:38 +0000;
a0df319 bump version by Joseph Lee <joseph.lee@u.nus.edu> 2021-06-23 18:28:09 +0800;
921e3a1 Merge pull request <a href="#27">#27</a> from yuukiiwa/master by Joseph Lee <joseph.lee@u.nus.edu> 2021-06-23 18:21:15 +0800;
1bbf941 map to txId by promoterId by Yuk Kei Wan <41866052+yuukiiwa@users.noreply.github.com> 2021-06-23 17:59:58 +0800;
ffed318 update docs by Joseph Lee <joseph.lee@u.nus.edu> 2021-05-26 04:30:45 +0800;
ca3f595 implement new functions by Joseph Lee <joseph.lee@u.nus.edu> 2021-05-26 04:29:56 +0800;
2599a8b deprecate plotPromoters by Joseph Lee <joseph.lee@u.nus.edu> 2021-05-26 04:29:08 +0800;
11928d3 match by promoterId by Joseph Lee <joseph.lee@u.nus.edu> 2021-05-25 02:03:53 +0800;
27f8b35 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:55:29 +0000;
0a66788 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:55:29 +0000;
84ad7d6 update for Bioc 3.13 by Joseph Lee <joseph.lee@u.nus.edu> 2021-05-11 22:48:44 +0800;
f0b1ebd allow non-standard species by Joseph Lee <joseph.lee@u.nus.edu> 2021-04-21 23:35:28 +0800;
c6107f3 report significance for alternative usage by Joseph Lee <joseph.lee@u.nus.edu> 2021-04-21 18:52:29 +0800;
7af741e dummy commit to check Bioc build by Joseph Lee <joseph.lee@u.nus.edu> 2021-04-10 21:33:54 +0800;
a0a34c3 update version and pkg site by Joseph Lee <joseph.lee@u.nus.edu> 2021-04-07 15:11:46 +0800;
391672e update documentation by Joseph Lee <joseph.lee@u.nus.edu> 2021-04-07 15:10:48 +0800;
a7245a9 store gene exp in assays by Joseph Lee <joseph.lee@u.nus.edu> 2021-04-07 15:10:04 +0800;
e1b8208 update NEWS by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 03:28:14 +0800;
687a343 update documentation by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 03:05:12 +0800;
904b30c update version by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:18:45 +0800;
a7b0c84 update vignette by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:12:31 +0800;
c9fcf48 update tests by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:12:25 +0800;
52deea7 update man by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:12:15 +0800;
5f0fec8 implement getAlternativePromoters by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:12:00 +0800;
96e6943 implement boxplotPromoters by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:11:50 +0800;
1d4d62d import necessary functions only by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:11:30 +0800;
6f53bbc update gitignore and buildignore by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:10:49 +0800;
889758c update DESCRIPTION and NAMESPACE by Joseph Lee <joseph.lee@u.nus.edu> 2021-03-25 02:10:27 +0800;
a30c6d1 update version by Joseph Lee <joseph.lee@u.nus.edu> 2021-01-19 21:16:09 +0800;
42f6560 handle condition vector syntax by Joseph Lee <joseph.lee@u.nus.edu> 2021-01-19 20:18:45 +0800;
ea8c4c0 update README by Joseph Lee <joseph.lee@u.nus.edu> 2021-01-19 20:18:17 +0800;
c5b3513 Merge remote-tracking branch 'upstream/master' by Joseph Lee <joseph.lee@u.nus.edu> 2020-11-23 10:57:03 +0800;
dd632f4 update vignette by Joseph Lee <joseph.lee@u.nus.edu> 2020-11-23 10:54:21 +0800;
07d9fe0 updated README by Joseph Lee <joseph.lee@u.nus.edu> 2020-11-23 10:53:47 +0800;
9e4b065 update NEWS by Joseph Lee <joseph.lee@u.nus.edu> 2020-11-23 10:53:16 +0800;
d402dd1 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 12:00:53 -0400;
a9bc3ac (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 12:00:53 -0400;
6f36e2f change print() to message() by Joseph Lee <joseph.lee@u.nus.edu> 2020-09-18 16:58:41 +0800;
6db530d update DESCRIPTION by Joseph Lee <joseph.lee@u.nus.edu> 2020-09-18 16:58:09 +0800;
02cb883 use dplyr for categorizing promoters (datatable segfaults) by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-29 10:34:05 +0800;
9567b86 update release date by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-21 17:16:51 +0800;
c3a8f4d Merge pull request <a href="#20">#20</a> from GoekeLab/proActiv-dev by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-21 16:59:13 +0800;
3f6a24f minor update to vignette by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-21 16:48:46 +0800;
00cff57 update DESCRIPTION by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-20 18:43:16 +0800;
42d51cf include tests for plotPromoters by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-20 18:43:07 +0800;
757a790 update documentation and webpage by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-20 17:13:46 +0800;
4ee51d9 update code documentation and webpage by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-20 17:07:19 +0800;
f8e2175 remove helper functions from html page by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:49:21 +0800;
ad35f3c update pkgdown docs for html webpage by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:40:17 +0800;
9dfb9e5 update vignette with new input data by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:39:27 +0800;
743a9dd update README with new input data by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:39:11 +0800;
4948b05 remove helper functions from exports by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:38:51 +0800;
f2b6d8c trim data and tests by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:37:21 +0800;
ce72aeb update tests with new input data by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:35:21 +0800;
66563aa update pre-computed promoter annotations by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:34:32 +0800;
3d0f1e0 update manual by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:32:43 +0800;
7c581d9 update code examples by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-19 01:30:51 +0800;
44854e2 update README by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-08 18:37:52 +0800;
246aad9 update navbar by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-08 17:29:27 +0800;
b01f8e6 change built site config by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-08 01:56:24 +0800;
8802092 update yaml by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-08 01:11:43 +0800;
fcaa968 update yaml by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-08 01:02:47 +0800;
7895f2b link to url by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-07 23:32:59 +0800;
f7248da include pkgdown by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-07 18:07:29 +0800;
9088e39 update function description by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-07 18:07:15 +0800;
1a87945 update README by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-07 18:07:01 +0800;
e7779bf update gitignore by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-07 18:06:48 +0800;
24262b9 update Rbuildignore by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-07 18:06:07 +0800;
c4fee4e Merge pull request <a href="#19">#19</a> from GoekeLab/proActiv-dev by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-04 14:28:01 +0800;
29abcd4 include badges by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-04 14:09:53 +0800;
04152d1 update release date by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-04 13:50:44 +0800;
f1a3611 add .tab (STAR) extension and set internal pro class to NA by Joseph Lee <joseph.lee@u.nus.edu> 2020-08-04 12:50:02 +0800;
a3da0f1 Merge pull request <a href="#18">#18</a> from jleechung/dev by Jonathan Göke <10560051+jonathangoeke@users.noreply.github.com> 2020-07-21 15:23:15 +0800;
360f1d0 update READme by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 15:19:46 +0800;
508d897 add vignette by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 13:30:24 +0800;
4f0228b update vignette data by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 13:30:11 +0800;
fe56658 add plotting function by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 13:29:54 +0800;
d1f1fb8 update NAMESPACE by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 13:29:34 +0800;
cf15fc5 trim width and add helper functions by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:28:26 +0800;
020bf3d add loadDb to re-exports by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:28:03 +0800;
166eb20 trim code width and add helper function by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:27:48 +0800;
e7dbe12 trim code width by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:27:25 +0800;
4731916 update NAMESPACE by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:24:53 +0800;
0e95fca update DESCRIPTION by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:24:33 +0800;
fc85ed3 update extdata files by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:24:20 +0800;
19fa7dc update docs by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:23:18 +0800;
40d67df update tests by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-21 01:22:08 +0800;
9b912af update tests by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-17 09:32:29 +0800;
70a1994 add re-exports to proActive namespace by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-17 09:32:16 +0800;
ab80f9d update proActiv with condition argument by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-17 09:31:59 +0800;
26bae15 update NAMESPACE by Joseph Lee <joseph.lee@u.nus.edu> 2020-07-17 09:31:29 +0800;