Package: phenopath
Type: Package
Title: Genomic trajectories with heterogeneous genetic and environmental backgrounds
Version: 1.22.0
Date: 2017-10-24
Author: Kieran Campbell
Maintainer: Kieran Campbell <kieranrcampbell@gmail.com>
Description: PhenoPath infers genomic trajectories (pseudotimes) in the presence of
  heterogeneous genetic and environmental backgrounds and tests for interactions 
  between them.
License: Apache License (== 2.0)
Imports:
  Rcpp (>= 0.12.8), 
  SummarizedExperiment,
  methods,
  stats,
  dplyr,
  tibble,
  ggplot2,
  tidyr
Suggests:
    knitr,
    rmarkdown,
    forcats,
    testthat,
    BiocStyle,
    SingleCellExperiment
biocViews: ImmunoOncology, RNASeq, GeneExpression, Bayesian, SingleCell, PrincipalComponent
LinkingTo: Rcpp
RoxygenNote: 6.0.1
VignetteBuilder: knitr