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### What is omXplore?
`omXplore` is a [Bioconductor
package](http://bioconductor.org/packages/omXplore) that provides
functions for the visualization and the statistical analysis of proteomics data.
It can deal with common Bioconductor formats suwh as as Msnset, `QFeatures`,
`MultiAssayExperiment`.
It is also possible to write your own plot modules so as to embed it into
the GUI of `omXplore`.
> Evolving the `DAPAR` package plots towards Shiny modules.
### Getting started
See the
[omXplore introduction](https://prostarproteomics.github.io/omXplore/articles/omXplore.html)
to get started with the visualization of data.
### License
The `omXplore` code is provided under a permissive [Artistic 2.0
license](https://opensource.org/licenses/Artistic-2.0). The
documentation, including the manual pages and the vignettes, are
distributed under a [CC BY-SA
license](https://creativecommons.org/licenses/by-sa/4.0/).
# Installation
To install this package, start R (version "4.3") and enter:
```
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("omXplore")
```
This will also install dependencies.
It is also possible to install `omXplore` from Github:
```
library(devtools)
install_github('prostarproteomics/omXplore')
```
For older versions of R, please refer to the appropriate Bioconductor release.
