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README.md
# Continuous integration The mzR project master branch is subjected to CI using travis: [![Build Status](https://travis-ci.org/sneumann/mzR.svg?branch=master)](https://travis-ci.org/sneumann/mzR) The devel branch is tested on multiple architectures by the BioC build farm: http://bioconductor.org/checkResults/devel/bioc-LATEST/mzR/ # Installation ## Installation on macOS If you install from source, you first need to install the netCDF headers and libraries: `brew install netcdf`, and then instal mzR the BioC way via: ``` if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("mzR", suppressUpdates = TRUE) ``` ## Installation on Linux We are not shipping the full set of boost headers due to size restrictions. This *might* cause compilation failure due to missing files. We have tested several OS and compiler build environments successfully, please report any compilation failures at https://github.com/sneumann/mzR/issues and we'll add the missing files. mzR-2.9.1 with boost-1.59.0 has been tested on the following compilers: On the BioC build farm (http://bioconductor.org/checkResults/devel/bioc-LATEST/mzR/) * malbec2 (Ubuntu 16.04.1, gcc-5.4.0) * tokay2 (Windows Server 2012 R2, MinGW-W64-4.9.3) * Failling oaxaca (Apple clang 3.5svn / 600.0.57) Also on: * Debian stretch/sid (gcc-5.4.0) * Ubuntu 16.04 (clang 3.8.0) * Ubuntu 16.04 (gcc-5.4.0) * Ubuntu 14.04 (gcc-4.8.2) * Ubuntu 12.04 (gcc-4.6.3) # Contributions Please read the [contributions guide and code of conduct](./CONTRIBUTIONS.md).