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Updating pwiz to 3_0_21263

Steffen Neumann authored on 23/09/2021 12:34:25
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+/*
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+ *
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+ * Copyright (c) 1998-2002
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+ * John Maddock
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+ *
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+ * Use, modification and distribution are subject to the 
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+ * Boost Software License, Version 1.0. (See accompanying file 
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+ * LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
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+ *
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+ */
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+
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+ /*
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+  *   LOCATION:    see http://www.boost.org/libs/regex for documentation.
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+  *   FILE         regex.cpp
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+  *   VERSION      see <boost/version.hpp>
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+  *   DESCRIPTION: Declares boost::basic_regex<> and associated
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+  *                functions and classes. This header is the main
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+  *                entry point for the template regex code.
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+  */
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+
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+
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+/* start with C compatibility API */
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+
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+#ifndef BOOST_RE_REGEX_HPP
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+#define BOOST_RE_REGEX_HPP
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+
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+#ifndef BOOST_REGEX_CONFIG_HPP
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+#include <boost/regex/config.hpp>
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+#endif
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+
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+#ifdef BOOST_REGEX_CXX03
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+#include <boost/regex/v4/regex.hpp>
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+#else
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+#include <boost/regex/v5/regex.hpp>
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+#endif
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+
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+#endif  // include
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+
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Browse code

drop old boost

From: Steffen Neumann <sneumann@ipb-halle.de>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mzR@125184 bc3139a8-67e5-0310-9ffc-ced21a209358

l.gatto authored on 15/12/2016 10:41:45
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-/*
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- *
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- * Copyright (c) 1998-2002
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- * John Maddock
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- *
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- * Use, modification and distribution are subject to the 
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- * Boost Software License, Version 1.0. (See accompanying file 
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- * LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
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- *
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- */
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-
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- /*
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-  *   LOCATION:    see http://www.boost.org/libs/regex for documentation.
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-  *   FILE         regex.cpp
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-  *   VERSION      see <boost/version.hpp>
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-  *   DESCRIPTION: Declares boost::basic_regex<> and associated
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-  *                functions and classes. This header is the main
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-  *                entry point for the template regex code.
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-  */
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-
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-
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-/* start with C compatibility API */
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-
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-#ifndef BOOST_RE_REGEX_HPP
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-#define BOOST_RE_REGEX_HPP
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-
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-#ifndef BOOST_REGEX_CONFIG_HPP
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-#include <boost/regex/config.hpp>
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-#endif
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-
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-#include <boost/regex/v4/regex.hpp>
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-
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-#endif  // include
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-
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-
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-
Browse code

checkout latest pwiz, ammend Makevars

From: Laurent <lg390@cam.ac.uk>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mzR@125180 bc3139a8-67e5-0310-9ffc-ced21a209358

l.gatto authored on 15/12/2016 10:21:41
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-/*
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- *
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- * Copyright (c) 1998-2002
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- * John Maddock
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- *
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- * Use, modification and distribution are subject to the 
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- * Boost Software License, Version 1.0. (See accompanying file 
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- * LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
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- *
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- */
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-
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- /*
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-  *   LOCATION:    see http://www.boost.org/libs/regex for documentation.
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-  *   FILE         regex.cpp
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-  *   VERSION      see <boost/version.hpp>
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-  *   DESCRIPTION: Declares boost::basic_regex<> and associated
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-  *                functions and classes. This header is the main
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-  *                entry point for the template regex code.
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-  */
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-
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-/* start with C compatibility API */
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-
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-#ifndef BOOST_RE_REGEX_HPP
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-#define BOOST_RE_REGEX_HPP
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-
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-#ifndef BOOST_REGEX_CONFIG_HPP
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-#include <boost/regex/config.hpp>
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-#endif
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-#include <boost/regex/v4/regex.hpp>
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-
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-#endif  // include
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-
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-
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+/*
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+ *
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+ * Copyright (c) 1998-2002
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+ * John Maddock
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+ *
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+ * Use, modification and distribution are subject to the 
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+ * Boost Software License, Version 1.0. (See accompanying file 
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+ * LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
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+ *
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+ */
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+
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+ /*
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+  *   LOCATION:    see http://www.boost.org/libs/regex for documentation.
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+  *   FILE         regex.cpp
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+  *   VERSION      see <boost/version.hpp>
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+  *   DESCRIPTION: Declares boost::basic_regex<> and associated
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+  *                functions and classes. This header is the main
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+  *                entry point for the template regex code.
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+  */
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+
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+
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+/* start with C compatibility API */
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+
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+#ifndef BOOST_RE_REGEX_HPP
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+#define BOOST_RE_REGEX_HPP
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+
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+#ifndef BOOST_REGEX_CONFIG_HPP
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+#include <boost/regex/config.hpp>
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+#endif
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+
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+#include <boost/regex/v4/regex.hpp>
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+
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+#endif  // include
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+
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Browse code

Commit made by the Bioconductor Git-SVN bridge.

Commit id: 0b3d4d9bb71e3ca5891b777610fc8dec103a6d61

Bumped version after KK's updates


Commit id: 9e04409b64757a177893d56c0300904f31945cb1

modified: src/pwiz/data/common/BinaryIndexStream.cpp modified: src/win/i386/libpwiz.a modified: src/win/x64/libpwiz.a


Commit id: f16b04258dc20bf3315beac99708e11728cfc12b

update precompiled lib for windows


Commit id: 5d56197f1148378d92e89b2d0a167e18c4b7ab2e

Bump version, tame .Rbuildignore


Commit id: 432da5bd294c9b87f7761e15bc814c3785c21abf

Merge remote-tracking branch 'origin/boost_159'


Commit id: 92be978bf72d90c2222a19ddf365f6d1acc9f20d

upadte Makevars


Commit id: ae75037a780cead56c4d20bedf822c94fb413677

upgrade to boost 1.5.9



git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mzR@110126 bc3139a8-67e5-0310-9ffc-ced21a209358

s.neumann authored on 01/11/2015 22:33:47
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-/*
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- *
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- * Copyright (c) 1998-2002
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- * John Maddock
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- *
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- * Use, modification and distribution are subject to the 
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- * Boost Software License, Version 1.0. (See accompanying file 
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- * LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
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- *
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- */
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-
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- /*
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-  *   LOCATION:    see http://www.boost.org/libs/regex for documentation.
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-  *   FILE         regex.cpp
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-  *   VERSION      see <boost/version.hpp>
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-  *   DESCRIPTION: Declares boost::basic_regex<> and associated
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-  *                functions and classes. This header is the main
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-  *                entry point for the template regex code.
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-  */
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-
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-/* start with C compatibility API */
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-
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-#ifndef BOOST_RE_REGEX_HPP
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-#define BOOST_RE_REGEX_HPP
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-
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-#ifndef BOOST_REGEX_CONFIG_HPP
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-#include <boost/regex/config.hpp>
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-#endif
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-
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-#include <boost/regex/v4/regex.hpp>
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-
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-#endif  // include
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-
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-
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+/*
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+ *
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+ * Copyright (c) 1998-2002
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+ * John Maddock
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+ *
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+ * Use, modification and distribution are subject to the 
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+ * Boost Software License, Version 1.0. (See accompanying file 
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+ * LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
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+ *
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+ */
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+
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+ /*
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+  *   LOCATION:    see http://www.boost.org/libs/regex for documentation.
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+  *   FILE         regex.cpp
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+  *   VERSION      see <boost/version.hpp>
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+  *   DESCRIPTION: Declares boost::basic_regex<> and associated
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+  *                functions and classes. This header is the main
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+  *                entry point for the template regex code.
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+  */
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+
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+
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+/* start with C compatibility API */
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+
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+#ifndef BOOST_RE_REGEX_HPP
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+#define BOOST_RE_REGEX_HPP
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+
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+#ifndef BOOST_REGEX_CONFIG_HPP
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+#include <boost/regex/config.hpp>
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+#endif
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+
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+#include <boost/regex/v4/regex.hpp>
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+
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+#endif  // include
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+
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+
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+
Browse code

Added the mzR package to the repository.

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mzR@57456 bc3139a8-67e5-0310-9ffc-ced21a209358

c.wong authored on 15/08/2011 19:53:29
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+/*
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+ *
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+ * Copyright (c) 1998-2002
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+ * John Maddock
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+ *
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+ * Use, modification and distribution are subject to the 
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+ * Boost Software License, Version 1.0. (See accompanying file 
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+ * LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
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+ *
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+ */
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+
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+ /*
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+  *   LOCATION:    see http://www.boost.org/libs/regex for documentation.
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+  *   FILE         regex.cpp
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+  *   VERSION      see <boost/version.hpp>
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+  *   DESCRIPTION: Declares boost::basic_regex<> and associated
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+  *                functions and classes. This header is the main
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+  *                entry point for the template regex code.
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+  */
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+
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+
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+/* start with C compatibility API */
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+
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+#ifndef BOOST_RE_REGEX_HPP
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+#define BOOST_RE_REGEX_HPP
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+
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+#ifndef BOOST_REGEX_CONFIG_HPP
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+#include <boost/regex/config.hpp>
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+#endif
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+
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+#include <boost/regex/v4/regex.hpp>
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+
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+#endif  // include
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+
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+