Browse code

make sure use only 1 TMT raw file

Laurent authored on 23/06/2017 04:55:06
Showing 2 changed files

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@@ -51,7 +51,7 @@
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 \examples{
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 library("msdata")
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-f <- msdata::proteomics(full.names = TRUE, pattern = "TMT_")
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+f <- msdata::proteomics(full.names = TRUE, pattern = "TMT_")[2]
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 isolationWindow(f)
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 rw <- openMSfile(f)
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@@ -148,7 +148,7 @@
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  close(mz)
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  ## A shortgun LCMSMS experiment 
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- f <- proteomics(full.names = TRUE, pattern = "^TMT")
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+ f <- proteomics(full.names = TRUE, pattern = "^TMT")[2]
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  x <- openMSfile(f, backend = "pwiz")
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  x
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  nChrom(x)