Package: mzR
Type: Package
Title: parser for netCDF, mzXML, mzData and mzML and mzIdentML files
       (mass spectrometry data)
Version: 2.25.4
Author: Bernd Fischer, Steffen Neumann, Laurent Gatto, Qiang Kou, Johannes Rainer
Maintainer: Steffen Neumann <sneumann@ipb-halle.de>,
	    Laurent Gatto <laurent.gatto@uclouvain.be>,
	    Qiang Kou <qkou@umail.iu.edu>
Description: mzR provides a unified API to the common file formats and
	parsers available for mass spectrometry data. It comes with a
	wrapper for the ISB random access parser for mass spectrometry
	mzXML, mzData and mzML files. The package contains the
	original code written by the ISB, and a subset of the
	proteowizard library for mzML and mzIdentML. The netCDF
	reading code has previously been used in XCMS.
License: Artistic-2.0
LazyLoad: yes
Depends: Rcpp (>= 0.10.1), methods, utils
Imports: Biobase, BiocGenerics (>= 0.13.6), ProtGenerics (>= 1.17.3), ncdf4
Suggests: msdata (>= 0.15.1), RUnit, mzID, BiocStyle (>= 2.5.19), knitr, XML, rmarkdown
VignetteBuilder: knitr
LinkingTo: Rcpp, zlibbioc, Rhdf5lib (>= 1.1.4)
RcppModules: Ramp, Pwiz, Ident
SystemRequirements: C++11, GNU make
URL: https://github.com/sneumann/mzR/
BugReports: https://github.com/sneumann/mzR/issues/
biocViews: ImmunoOncology, Infrastructure, DataImport, Proteomics, Metabolomics,
	MassSpectrometry
RoxygenNote: 6.0.1