Package: mzR
Type: Package
Title: parser for netCDF, mzXML, mzData and mzML and mzIdentML files
       (mass spectrometry data)
Version: 2.8.1
Author: Bernd Fischer, Steffen Neumann, Laurent Gatto, Qiang Kou
Maintainer: Bernd Fischer <b.fischer@dkfz.de>,
	    Steffen Neumann <sneumann@ipb-halle.de>,
	    Laurent Gatto <lg390@cam.ac.uk>,
	    Qiang Kou <qkou@umail.iu.edu>
Description: mzR provides a unified API to the common file formats and
        parsers available for mass spectrometry data. It comes with a
        wrapper for the ISB random access parser for mass spectrometry
        mzXML, mzData and mzML files. The package contains the
        original code written by the ISB, and a subset of the
        proteowizard library for mzML and mzIdentML. The netCDF
        reading code has previously been used in XCMS.
License: Artistic-2.0
LazyLoad: yes
Depends: Rcpp (>= 0.10.1), methods, utils
Imports: Biobase, BiocGenerics (>= 0.13.6), ProtGenerics
Suggests: msdata (>= 0.3.5), RUnit, mzID, BiocStyle, knitr, XML
VignetteBuilder: knitr
LinkingTo: Rcpp, zlibbioc
RcppModules: Ramp, Pwiz, Ident
SystemRequirements: C++11, GNU make, NetCDF
URL: https://github.com/sneumann/mzR/
BugReports: https://github.com/sneumann/mzR/issues/
biocViews: Infrastructure, DataImport, Proteomics, Metabolomics,
        MassSpectrometry